Template-based Modeling Results for NAGZ_ECOLI

Submitted Primary Sequence

>Length 341
MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRAASRNRLVVAVDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSDVDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKAISTRLNQLHERWQEEKAGH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRAASRNRLVVAVDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSDVDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKAISTRLNQLHERWQEEKAGH
CCCEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRAASRNRLVVAVDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSDVDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKAISTRLNQLHERWQEEKAGH
42100000312302231220023121000000121132121023003102311413000000121010110331113000020001010231002001200210010012030101000000012101001320122103100200110020025110100010000100121112230111221121022220100010033230100000000012023310100220022001320212000000000020011112112000000300000000011230011002200211032012014323123310120021200011023013312333444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRAASRNRLVVAVDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSDVDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKAISTRLNQLHERWQEEKAGH
1	MUSTER	1tr9A	0.517	0.930	2.715	threading_1	LGPLWLDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPILIGVDQEGGRVQRFREGFSRIPPAQYYARAEN----GVELAEQGGWLAAELIAHDVDLSFAPVLD-GFACKAIGNRAFGEDVQTVLKHSSAFLRGK--AVGATTGKHFPGHGAVIADSHLETPYDERETIA----QDAIFRAQIEAG--VLDAPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSEGAA--VGGPVERSHQALVAGCDILI-CNKREAAVEVLDNL-PIEVPQAEALLKKQQFSYSELKRLERWQQASANQRLIEQFS-------
2	SPARKS	3sqla	0.252	0.944	5.253	threading_2	IAQVVRGAPQWEADQTTLQRWIEAGIGGVILLGGS---AAEVAQKTKQLQSWAEIPLLIAADIEEGVGQRFRGATEFPPPAFGEIWRTDPHQAIALAE-TGATTAQEALSLGINWVLAPVLDVNPHNPVINIRAFGETPDQVSALGTAFIRGAQQYAVLTTAKHFPGHGDTATDSHLALPTISHDDTRLNTVELPPFKAAIQGG-VDAVN-AHLIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDAL-VGGITQFAAPDTVVVQAIAAGADILLPPD------------VDGAIIAIETAIKTGQLSESRIYESVERIWQAKQKILTATPSTFPQGIS
3	PROSPECT2	3sqlA1	0.239	0.944	4.149	threading_3	LFDYERPYPQWEADQTTLQRWIEAGIGGVILLGGS---AAEVAQKTKQLQSWAEIPLLIAADIEEGVGQRFRGATEFPPPAFGEIWRTDPHQA-IALAETGATTAQEALSLGINWVLAPVLDVNPHNPVINIRAFGETPDQVSALGTAFIRGAQQYAVLTTAKHFPGHGDTATDSHLALPTISHDDTRLNTVELPPFKAAIQGG--VDAVNAHLIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDAL-VGGITQFAAPDTVVVQAIAAGADILLPPD------------VDGAIIAIETAIKTGQLSESRIYESVEIWQAKQKILETRKTVAVLERAT
4	PPA-I	1tr9A	0.524	0.930	4.200	threading_4	LGPLWLDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPILIGVDQEGGRVQRFREGFSRIPPAQYYARAEN----GVELAEQGGWLAAELIAHDVDLSFAPVLD-GFACKAIGNRAFGEDVQTVLKHSSAFLRGK--AVGATTGKHFPGHGAVIADSHLETPYDERETI----AQDAIFRAQIEAGVLD--APAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSEGAA--VGGPVERSHQALVAGCDILI-CNKREAAVEVLDNL-PIEVPQAEALLKKQQFSYSELKRLERWQQASANQRLIEQFS-------
5	HHPRED-l	2oxn_A	0.565	0.977	5.815	threading_5	MGPLWLDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPILIGVDQEGGRVQRFREGFSRIPPAQYYAR-AEN--GVELAEQGGWLMAAELIAHDVDLSFAPVLDMGFACKAIGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIADSHLETPYDER--ETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIMEVPQAEALLKKQQFSYSELKRLERWQQASANMQRLIEQFSEHHH--
6	HHPRED-g	2oxn_A	0.565	0.977	6.312	threading_6	MGPLWLDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPILIGVDQEGGRVQRFREGFSRIPPAQYYAR-AEN--GVELAEQGGWLMAAELIAHDVDLSFAPVLDMGFACKAIGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIADSHLETPYDER--ETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIMEVPQAEALLKKQQFSYSELKRLERWQQASANMQRLIEQFSEHHH--
7	SP3	3teva	0.271	0.865	5.546	threading_7	PGQLLIDLPGPELDKDTAAYLREHGIGAVCLFGKNVESAEQLRRLCADLREVGE-HALIAIDHAPS---------------ASLGAADD----QQLTEDVNAALARQLRSVGINWNFTPVLDINVNNPVIGDRAYGSDAARVTRHGRAALAGHTREGVAPCAKHFPGHGDTHQDSHLALPRVSKSRAELDAGELAPFRALLP---ETPAITAHIVYDALDAHPATLSPRILTGLLREEWGYDGVIVTDS--GQAIDANYGRGEAAVRALRAGADLVALGR-REVQQATLAAVAEYV----PENQAAVATKRERLRALARRFPAQA----------------
8	SAM-T99	3cqmA	0.252	0.965	6.181	threading_8	GQMLMPDFRNWKMNDEVASLVKKYQFGGIILFAENVKTTKQTVQLTDDYQKASPKPLMLSIDQEGGIVTRL-GEGTNFPGNMALGAARS----RINAYQTGSIIGKELSALGINTDFSPVVDINPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLVSHGQERLREVELYPFQKAIDAG-ADMVMTAHVQFPAFDDVPATLSKKVMTGLLRQEMGFNGVIVTDALNMKAIADHFGQEEAVVMAVKAGVDIALMPASVTSLKEEQK--FARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMYPARNSD----
9	MUSTER	3tevA	0.275	0.865	2.597	threading_9	PGQLLIDLPGPELDKDTAAYLREHGIGAVCLFGKNVESAEQLRRLCADLREVGE-HALIAIDHAPS---------------ASLGAADD----QQLTEDVNAALARQLRSVGINWNFTPVLDINVANPVIGDRAYGSDAARVTRHGRAALAGHTREGVAPCAKHFPGHGDTHQDSHLALPRVSKSRAELDAGELAPFRALLPE---TPAITAHIVYDALDAHPATLSPRILTGLLREEWGYDGVIVTDS--GQAIDANYGRGEAAVRALRAGADLVALGR---------REVQQATLAAVAEYVPEN---------QAAVATKRERLRALARRFPA--QA-
10	SPARKS	3teva	0.278	0.865	5.124	threading_10	PGQLLIDLPGPELDKDTAAYLREHGIGAVCLFGKNVESAEQLRRLCADLREV-GEHALIAIDHAPS---------------ASLGAADD----QQLTEDVNAALARQLRSVGINWNFTPVLDINPANPVIGDRAYGSDAARVTRHGRAALAGHTREGVAPCAKHFPGHGDTHQDSHLALPRVSKSRAELDAGELAPFRALLPE---TPAITAHIVYDALDAHPATLSPRILTGLLREEWGYDGVIVTDS--GQAIDANYGRGEAAVRALRAGADLVALGR-REVQQATLAAVAEYVPENQAAVAT----KRERLRALARRFPAQA----------------

Predicted Tertiary Structure


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TM-score=0.956 to 1tr9A SCOP code=c.1.8.7	TM-score=0.956 to 1tr9A SCOP code=c.1.8.7	TM-score=0.802 to 1tr9A SCOP code=c.1.8.7	TM-score=0.778 to 1tr9A SCOP code=c.1.8.7	TM-score=0.958 to 1tr9A SCOP code=c.1.8.7