Template-based Modeling Results for PTW3C_ECOLI

Submitted Primary Sequence

>Length 648
MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQAGGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGIITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINRFYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAASQNVWMLLVMGVIFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLTQLATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVIVGAKAESIGDAMKKVVARGPVAAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDDFSGLIIKAQGHIVAGQTPLYEIKK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQAGGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGIITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINRFYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAASQNVWMLLVMGVIFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLTQLATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVIVGAKAESIGDAMKKVVARGPVAAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDDFSGLIIKAQGHIVAGQTPLYEIKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCCEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEECCCCEEECHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCEEEEEEEEEEEEEECHHHCCHHHHHHCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEHHHCCCHHHHHCCCCCCEEEECCCCEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEEECEEEECCCCEEEEECCCCEECCCCEEEEEEHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCEEECCCEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQAGGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGIITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINRFYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAASQNVWMLLVMGVIFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLTQLATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVIVGAKAESIGDAMKKVVARGPVAAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDDFSGLIIKAQGHIVAGQTPLYEIKK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQAGGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGIITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINRFYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAASQNVWMLLVMGVIFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLTQLATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVIVGAKAESIGDAMKKVVARGPVAAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDDFSGLIIKAQGHIVAGQTPLYEIKK
1	MUSTER	1ax3A	0.401	0.250	1.062	threading_1	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIAEPLQNEIGEEVFVSPITGEIHPITDVPDQVFSGKMMGDGFAILPSEGIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGEGFTSFVSEGDRVEPGQKLLEVDLDAVKPNVPSLMTPIVFTNLAEGETVSIKASGSVNREQEDIVKIEK
2	PROSPECT2	3a0oA	0.067	0.875	2.099	threading_2	PGRSARHAAAQTSLWLNSEQLSAFADAVAKDPNHCGWAEFYEKSVEPWLERPVMPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLLAVA-------AWDT--KGATSRAYNDEAGFRVVVALAWG-----------------YDWLYDHLSEDERRTVRSVLLERTREVA-------------------------DHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPWAGTDWMTGMAYLIEAANLIRSYFQNTGRFPLYTKAPGTRRANFGD-------DSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNY------GWWDLNFDDLVYRHDYPQVEAVSPADLPALAVFWATIQKDMEDPD-------RHLQFVFKSSPAFVLYAHGEDVAFNSQMHLNWRRQTRSKNAVLIGGKGQYAEKDKALARRAAGRIVSVEEQPGHVRIVGDA--TAAYQVANPLVTHFVNDSYEVECSEPQELQWLCTGRSSFRYNGRKAGFYGQFVYSS----GGTPQISAVEGFPDILDIHHHVCATVPVPYSLKEPKRIFSFIDDQGFSTDIYFSDVD----DERFKLSLPK
3	SP3	1j0ma	0.139	0.963	1.458	threading_3	SDEFDALRIKWATLLTP-ADSDIAARTDKLAQDANDYWEDMDLSRTYIWYALNVNAVYERLRTMALTTVGADLKEDILDALDWLYVNSYNSTRSRSALGIPMSLNDTAVLLYDDISAARMATYMDTI--DYFTPSITGANRAWQAIVVGVRAVKLAAARNGLSTTFAYTGGYGSSVLETTANLMYLPNQSNVWQWIYAYRPLLYKGAMMDMVRGEISRSYAQDHAVGHGIVASIVRLAQFAPAPHAAAFKQI-------AKRVIQEDTFSSFYGDVTDTIRLAKAIVAPAAPNLYKQYAAMDRAVLQRPGFALGLAYS----TRISSYES-INSENGRWYTGAGATYDLAQYSEDYWPTVDAY-RIPGASGTPIASGTGTSSVSLAGQYGASGMDLLSAFMFDDEIVALGSGISIPIETVVDNRKLNGAGDNAWTANGALSTGLGVAQTLTGVNNTADGSDIGYYFPGGATLQTKREARTGTWKQINNRPATPSTAVTRNYETMWSYGYVLLPNKTSAQVGAYAADPAIEIVVNTSSVKEKTLGLVGANFWTDTT---QTADLITSNKKASVMTREIADERLEASVSDPT--QANNGTIAIELA-RSAEGYSADPGITVTQLAPTIKFTVNVNGA--KGKSFHASFQL
4	SPARKS	1gpr_	0.405	0.244	4.082	threading_4	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPLQNEIGEEVFVSPITGEIHPITDVPDQVFSGKMMGDGFAILPSEGIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGEGFTSFVSEGDRVEPGQKLLEVDLDAVKPNVPSLMTPIVFTNLAEGETVSIKASGSVNREQEDIVKIE-
5	PPA-I	1gleF	0.466	0.248	4.321	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLFDKLKSLVSTIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEI-KELIKLSGSVTVGETPVIRIKK
6	PROSPECT2	1qgra	0.096	0.961	1.825	threading_6	MELITILEKTVAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLARPSSASQCVAGIACAELIPQLVANVTNPNSTEHMKESTLEAIGYICLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFESERHFIMQVVCEATQVRVAALQNLVKIMSLYYMETYMGPALFAITIEAMKSDIDEVALQGIEFWTSKFYAKGALQYLVPILTQTLTAAGVCLMLLATCCEDDIVPHVLRDAAVMAFGCILESQLKPLVIQAMPTLIELVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSQKLLETTDRPDGHQNNLRSSAYESL-----MEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRI-----QFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGVQEDALMAVSTAFKPLKNYAEYQVCLENLGN-----ENVHRSVAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQE----------NVHPDVMLVQPRVEFILSFIDHIAGDEDGKDVLKLVEARPMIHELLTEGRRSKTNKAKTLQA
7	HHPRED-l	1f3z_A	0.483	0.230	6.063	threading_7	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIK-LSGSVTVGETPVIRIK-
8	SP3	1rw9a	0.160	0.948	1.362	threading_8	------------PGAAEFAALRNRWVDQITGRNDPDFAKAITALNNKAADSLKLDVKKGRTSVFTDLAKDAEMVTTYTRLSQLATAWATPTAAVDAAVLAAIKAGLADANCYNDSWEIGVPRALADAMHAELSAAERTAYCAAIDHFVWLQFPPKRGKITSVGANRVDLC-QGIIIRSLADPTKLNHAVAGLSQ---VWQYV--TSGDGIFRDG---SFIQHSTTP---YTGSYGVVLLTGLSKLFSLLGEVSDPTRSIFFDAVEGSFAPVMINGEANTGYDLGASAIEAILLLPATAARWRGLCAGWIARDTYRPILNSASVPRTALVKQLEATGVAPVEATGHLFPAMDRTMHRLSLALSSNRITSDLGQYDDATPLPDKVEGQWGAAVPADEWSTALGEVAHLVGPGRTGLTARKSWF----VSGDVTVCLGA-DISTASGAKVETIV-DHRNLHQGSNTLTTAAGTIAGTAGTVEVLGDGRWVHLEGFLDDSPLHVLRETRSGSWSGVNGSATVQFATLYVNHGVG--PVAGYMVAPASVDLTRKLLEGNKYSVIRDATAQSVEFKTAKTTAATGPACVVFSRHGNELSPTQKAAGLTLTLPEGTWSSVLEGTLGTDADGRSTLTLDTTGL--SGKTKLIKLKR
9	HHPRED-g	1f3z_A	0.493	0.231	5.200	threading_9	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKEL-IKLSGSVTVGETPVIRIKK
10	SP3	1gpr_	0.405	0.244	2.947	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPLQNEIGEEVFVSPITGEIHPITDVPDQVFSGKMMGDGFAILPSEGIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGEGFTSFVSEGDRVEPGQKLLEVDLDAVKPNVPSLMTPIVFTNLAEGETVSIKASGSVNREQEDIVKIE-

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.617 to 1ax3A SCOP code=b.84.3.1	TM-score=0.565 to 1n7qA SCOP code=a.102.3.2	TM-score=0.617 to 1ax3A SCOP code=b.84.3.1	TM-score=0.874 to 1j0nA SCOP code=a.102.3.2	TM-score=0.621 to 1gprA SCOP code=b.84.3.1