Template-based Modeling Results for NADR_ECOLI

Submitted Primary Sequence

>Length 410
MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPSAQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDDTRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIETVLVDPKRTFMSISGAQIRENPFRYWEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEEDYDSRFLRCVELVREMMGEQR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPSAQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDDTRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIETVLVDPKRTFMSISGAQIRENPFRYWEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEEDYDSRFLRCVELVREMMGEQR
CCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCHHHHHHHCCHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPSAQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDDTRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIETVLVDPKRTFMSISGAQIRENPFRYWEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEEDYDSRFLRCVELVREMMGEQR
44112112200342202022003213112100120222314232131020002001032343332000000201101100010012004202100000001224332213312223322022002001201422210100001321032122013000200220023312311000002322122013201010000114232120101102210120041012303211010000000321111100210032131200220022002221223322121110120010002111101421230000001000010002212232231021002213100000022203122212212222211320130013003313120020233213100220020022112334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPSAQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDDTRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIETVLVDPKRTFMSISGAQIRENPFRYWEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEEDYDSRFLRCVELVREMMGEQR
1	MUSTER	1lw7A	0.512	0.810	2.290	threading_1	--------------------------------------------------------------EKKVGVIFGKFYPVHTGHINIYEAFSK-VDELHVIVCSDTVRDLKLFYDSKKR--PTVQDRLRWQQIFKYQKNQIFIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTPFQYWKFIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYP-QALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDS-IKEYPFDVTILLKNNTEQK-----------QRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEE
2	SPARKS	1lw7a	0.515	0.810	5.117	threading_2	--------------------------------------------------------------EKKVGVIFGKFYPVHTGHIN-IYEAFSKVDELHVIVCSDTVRDLKLFYDSKKRP--TVQDRLRWQQIFKYQKNQIFIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTPFQYWKFIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQ-ALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSIK-EYPFDVTILLKNNT-----------EQKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEE
3	PROSPECT2	1lw7a	0.500	0.810	2.926	threading_3	--------------------------------------------------------------EKKVGVIFGKFYPVHTGHINIY-EAFSKVDELHVIVCSDTVRDLK--LFYDSKKRPTVQDRLRWQQIFKYQKNQIFIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTPFQYWKFIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYP-QALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSIKE-YPFDVTILLKNNTEQKQ-----------RQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEE
4	PPA-I	1lw7A	0.512	0.810	3.696	threading_4	--------------------------------------------------------------EKKVGVIFGKFYPVHTGHINIYEAFSK-VDELHVIVCSDTVRDLKLFYDSKK--RPTVQDRLRWQQIFKYQKNQIFIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTPFQYWKFIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYP-QALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDS-IKEYPFDVTILLKNNTEQK-----------QRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEE
5	HHPRED-l	1lw7_A	0.549	0.800	5.696	threading_5	--------------------------------------------------------------EKKVGVIFGKFYPVHTGHIN-IYEAFSKVDELHVIVCSDTVRDLKLFYDSK----PTVQDRLRW-QQIFKYQKNIFIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTPFQYWKFIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQ-ALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDS-IKEYPFDVTILLKNNTE-----------QKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEE-
6	HHPRED-g	1lw7_A	0.547	0.802	5.520	threading_6	--------------------------------------------------------------EKKVGVIFGKFYPVHTGHIN-IYEAFSKVDELHVIVCSDTVRDLKLFYDSK----PTVQDRLRW-QQIFKYQKNIFIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTPFQYWKFIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQ-ALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDS-IKEYPFDVTILLKNNTE-----------QKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEE
7	SP3	1lw7a	0.515	0.810	4.951	threading_7	--------------------------------------------------------------EKKVGVIFGKFYPVHTGHIN-IYEAFSKVDELHVIVCSDTVRDLKLFYDSKKRP--TVQDRLRWQQIFKYQKNQIFIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTPFQYWKFIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYP-QALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSIK-EYPFDVTILLKNNTEQKQ-----------RQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEE
8	SAM-T99	1lw7A	0.535	0.802	5.501	threading_8	--------------------------------------------------------------EKKVGVIFGKFYPVHTGHIN-IYEAFSKVDELHVIVCSDTVRDLKLFYDS--KKRPTVQDRLRWQ-QIFKYQKNIFIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTPFQYWKFIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDY-PQALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSIKEY-PFDVTILLKNN------------EQKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEE-
9	MUSTER	1lw7A2	0.560	0.405	1.075	threading_9	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYP-QALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDS-IKEYPFDVTILLKNNTEQK-----------QRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEE
10	SPARKS	1lw7a2	0.555	0.422	2.881	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQ-ALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSIK-EYPFDVTILLKNNTEQKQ-----------RQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.887 to 1lw7A SCOP code=c.26.1.3	TM-score=0.891 to 1lw7A SCOP code=c.26.1.3	TM-score=0.891 to 1lw7A SCOP code=c.26.1.3	TM-score=0.888 to 1lw7A SCOP code=c.26.1.3	TM-score=0.889 to 1lw7A SCOP code=c.26.1.3