Template-based Modeling Results for NADC_ECOLI

Submitted Primary Sequence

>Length 297
MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQSLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLRSALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVENLEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVDFISVGALTKHVQALDLSMRFR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQSLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLRSALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVENLEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVDFISVGALTKHVQALDLSMRFR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHEECCCCCEECCCCCCCEEECCCCHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEECHHHCCCCCCCEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQSLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLRSALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVENLEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVDFISVGALTKHVQALDLSMRFR
553442223211220032021101100020032101121212210002002331201010002220000013001100221213201010003313202322000102020210110020010002100000110110022032220000001320210200120000011011121011300002221010101022002101322331201010221310120030101000002021310220033122201010012012300220031200000000003204111010213
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQSLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLRSALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVENLEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVDFISVGALTKHVQALDLSMRFR
1	MUSTER	3pajA	0.614	0.993	3.502	threading_1	M-KETHNSQDRLAYLKQQLPADITRSVIDTLKEDLGGTLDPAADITASLIPADRISTATIITREAGVFCGQLWADEVFKQL-GGQVSIEWHVQDGDTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATARYVQELKGTQCRLLDTRKTIPGLRSALKYAVACGGGYNHRIGVFDAYLIKENHIIACGGIRQAISTAKQLNPGKPVEVETETLAELEEAISAGADIIMLDNFSLEMMREAVKINAGRAALENSGNITLDNLKECAETGVDYISVGALTKHLKALDLSMRFK
2	SPARKS	3lara	0.336	0.943	5.851	threading_2	-----MDAEGLALLL---PPVTLAALVDSWLREDCPGLN------YAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQL---NCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADALKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLF
3	PROSPECT2	3pajA	0.608	0.997	6.058	threading_3	YFQSTHNSQDRLAYLKQQLPADITRSVIDTLKEDLGGTLDPAADITASLIPADRISTATIITREAGVFCGQLWADEVFKQL-GGQVSIEWHVQDGDTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATARYVQELKGTQCRLLDTRKTIPGLRSALKYAVACGGGYNHRIGVFDAYLIKENHIIACGGIRQAISTAKQLNPGKPVEVETETLAELEEAISAGADIIMLDNFSLEMMREAVKINAGRAALENSGNITLDNLKECAETGVDYISVGALTKHLKALDLSMRFK
4	PPA-I	3pajA	0.608	0.997	4.331	threading_4	AMKETHNSQDRLAYLKQQLPADITRSVIDTLKEDLGGTLDPAADITASLIPADRISTATIITREAGVFCGQLWADEVFKQL-GGQVSIEWHVQDGDTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATARYVQELKGTQCRLLDTRKTIPGLRSALKYAVACGGGYNHRIGVFDAYLIKENHIIACGGIRQAISTAKQLNPGKPVEVETETLAELEEAISAGADIIMLDNFSLEMMREAVKINAGRAALENSGNITLDNLKECAETGVDYISVGALTKHLKALDLSMRFK
5	HHPRED-l	1qap_A	0.861	0.970	4.582	threading_5	--------DDRRDALLERINLDIPAAVAQALREDLGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIHANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVENLDELDDALKAGADIIMLDNFNTDQMREAVKRVNGQARLEVSGNVTAETLREFAETGVDFISVGALTKHVRALDLSMRF-
6	HHPRED-g	1qap_A	0.858	0.973	4.238	threading_6	--------DDRRDALLERINLDIPAAVAQALREDLGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIHANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVENLDELDDALKAGADIIMLDNFNTDQMREAVKRVNGQARLEVSGNVTAETLREFAETGVDFISVGALTKHVRALDLSMRFC
7	SP3	3lara	0.336	0.943	6.117	threading_7	M-----DAEGLALLL---PPVTLAALVDSWLREDCPGLN------YAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQ-LNC--QVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGATGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADALKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLF
8	SAM-T99	1qapA	0.858	0.973	4.328	threading_8	--------DDRRDALLERINLDIPAAVAQALREDLGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIHANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVENLDELDDALKAGADIIMLDNFNTDQMREAVKRVNGQARLEVSGNVTAETLREFAETGVDFISVGALTKHVRALDLSMRFC
9	MUSTER	1qapA	0.858	0.973	3.127	threading_9	--------DDRRDALLERINLDIPAAVAQALREDLGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIHANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVENLDELDDALKAGADIIMLDNFNTDQMREAVKRVNGQARLEVSGNVTAETLREFAETGVDFISVGALTKHVRALDLSMRFC
10	SPARKS	3l0ga	0.379	0.916	5.554	threading_10	--------------------ISFSEIIHNALKEDLGD----KGDITTNSILINEKVNFAINTRENLVVCGIPILEEVFNM-NKEHVKYEIHKKDGDITGKNSTLVSGEALAIYLLPIERVILNFIQHASGIASITRQFVDEVSGTKVKIRSTRKTTPGLRMLDKYSVCIGGGESYRDNLCDGVLIKDNHIASCGSITLAIQRLRKNLKNEYIAIECDNISQVEESLSNNVDMILLDNMSISEIKKAVDIVNGKSVLEVSGCVNIRNVRNIALTGVDYISIGCITNSFQNKDIGLDIE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.957 to 1qapA SCOP code=c.1.17.1	TM-score=0.954 to 1qapA SCOP code=c.1.17.1	TM-score=0.884 to 1qpqA SCOP code=c.1.17.1	TM-score=0.962 to 1qapA SCOP code=c.1.17.1	TM-score=0.958 to 1qapA SCOP code=c.1.17.1