Template-based Modeling Results for MURD_ECOLI

Submitted Primary Sequence

>Length 438
MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG
CCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCEEEECCCCHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCEEEEECCHHHHCCCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCEEEECCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCEEEEEECCCHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG
454242110000000100100010032210101001242233002314320210012123310220100000110122120010014130200000100021030200000012031100100010032021200000101100011124322000010011113202212010000000031001303110210110112003102000001202101213223320000003233220112202000103212002132040202000000000000021020222101300220211311010002121010011130010000000031032312000000011321202200300222001000002102100212331021031022002101220331000000000011120310320021013004314
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG
1	MUSTER	2jfgA	0.982	0.995	3.659	threading_1	-ADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRY-PFGLQQYRAALRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG
2	SPARKS	3lk7a	0.291	0.973	6.262	threading_2	ITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKENPTAQSLLEEGIKVVCGSHPLELLDEDFCYIKNPGIPYNNP-VKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTI-AEVLNAGGQRGLLAGNIGFPASEVVQANDKDTLVELSSFQLG-VKEFRPHIAVITNL-PTHLDYH-GSFEDYVAAKWNIQNQSDFLVLNFNQGISKELAKTKATIVPFSTTEKVDGAYVQDK--QLFYKGEN-ISVDDIGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFD-NTKVILIAGGLDRGNEFDELIPDITG--LKHVVLGESASRVKRAAQKAGSDALDVRDAVHKAYEVAQQGDVILLSPANASWD-YKNFEVRGDEFIDTFESLR
3	PROSPECT2	3lk7A	0.279	0.973	5.119	threading_3	ITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDEAQSLLEEGIKVVCGSHPLELLDEDFCYIKNPGIPYNNP-VKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTIA-EVLNAGGQRGLLAGNIGFPASEVVQANDKDTLVELSSFQLGVK-EFRPHIAVITNL-PTHLDYHG-SFEDYVAAKWNIQNQSDFLVLNFNQGISKELAKTKATIVPFSTTEKVDGAYVQDKQLFY---KGENISVDDIGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFD-NTKVILIAGGLDRGNEFDELIPDITGLK--HVVLGESASRVKRAAQKAYSDALDVRDAVHKAYEVAQQGDVILLSPANASWD-YKNFEVRGDEFIDTFESLE
4	PPA-I	2jfgA	0.982	0.995	6.602	threading_4	-ADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRY-PFGLQQYRAALRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG
5	HHPRED-l	2x5o_A	1.000	0.993	4.985	threading_5	-ADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAA-LRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKEL-
6	HHPRED-g	2x5o_A	1.000	0.995	4.609	threading_6	-ADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAA-LRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG
7	SP3	3lk7a	0.291	0.973	7.120	threading_7	ITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPNPTAQSLLEEGIKVVCGSHPLELLDEDFCYIKNPGIPYNNP-VKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTI-AEVLNAGGQRGLLAGNIGFPASEVVQANDKDTLVELSSFQLG-VKEFRPHIAVITNL-PTHLDYH-GSFEDYVAAKWNIQNQSDFLVLNFNQGISKELAKTKATIVPFSTTEKVDGAYVQDK--QLFYKGE-NISVDDIGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFD-NTKVILIAGGLDRGNEFDELIPDITG--LKHVVLGESASRVKRAAQKAGSDALDVRDAVHKAYEVAQQGDVILLSPANASWD-YKNFEVRGDEFIDTFESLR
8	SAM-T99	2jfgA	1.000	0.993	7.819	threading_8	-ADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAA-LRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKEL-
9	MUSTER	3lk7A	0.284	0.973	3.203	threading_9	ITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKENPTAQSLLEEGIKVVCGSHPLELLDEDFCYIKNPGIPYNNP-VKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTIAEVLNAG-GQRGLLAGNIGFPASEVVQANDKDTLVELSSFQLG-VKEFRPHIAVITNL-PTHLDYH-GSFEDYVAAKWNIQNQSDFLVLNFNQGISKELATTKATIVPFSTTEKVDGAYVQDK--QLFYKG-ENISVDDIGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFD-NTKVILIAGGLDRGNEFDELIPDITG--LKHVVLGESASRVKRAAQKAYSDALDVRDAVHKAYEVAQQGDVILLSPANASWD-YKNFEVRGDEFIDTFESLR
10	SPARKS	2uaga	0.967	0.977	5.546	threading_10	-ADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRY-PFGLQQYRAALRIYENAKVCVVNADDALT-----MPERCVSFGVNMGD---YHLNHETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.995 to 2jfgA TM-score=0.999 to native SCOP code=c.5.1.1	TM-score=0.995 to 2jfgA TM-score=0.999 to native SCOP code=c.5.1.1	TM-score=0.715 to 2jfgA TM-score=0.718 to native SCOP code=c.5.1.1	TM-score=0.706 to 2jfgA TM-score=0.708 to native SCOP code=c.5.1.1	TM-score=0.995 to 2jfgA TM-score=0.999 to native SCOP code=c.5.1.1

Experimental Structure

Download 2jfgA

SCOP code=c.5.1.1