Template-based Modeling Results for MRR_ECOLI

Submitted Primary Sequence

>Length 304
MTVPTYDKFIEPVLRYLATKPEGAAARDVHEAAADALGLDDSQRAKVITSGQLVYKNRAGWAHDRLKRAGLSQSLSRGKWCLTPAGFDWVASHPQPMTEQETNHLAFAFVNVKLKSRPDAVDLDPKADSPDHEELAKSSPDDRLDQALKELRDAVADEVLENLLQVSPSRFEVIVLDVLHRLGYGGHRDDLQRVGGTGDGGIDGVISLDKLGLEKVYVQAKRWQNTVGRPELQAFYGALAGQKAKRGVFITTSGFTSQARDFAQSVEGMVLVDGERLVHLMIENEVGVSSRLLKVPKLDMDYFE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTVPTYDKFIEPVLRYLATKPEGAAARDVHEAAADALGLDDSQRAKVITSGQLVYKNRAGWAHDRLKRAGLSQSLSRGKWCLTPAGFDWVASHPQPMTEQETNHLAFAFVNVKLKSRPDAVDLDPKADSPDHEELAKSSPDDRLDQALKELRDAVADEVLENLLQVSPSRFEVIVLDVLHRLGYGGHRDDLQRVGGTGDGGIDGVISLDKLGLEKVYVQAKRWQNTVGRPELQAFYGALAGQKAKRGVFITTSGFTSQARDFAQSVEGMVLVDGERLVHLMIENEVGVSSRLLKVPKLDMDYFE
CCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCEECCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCEEEEEEEEECHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTVPTYDKFIEPVLRYLATKPEGAAARDVHEAAADALGLDDSQRAKVITSGQLVYKNRAGWAHDRLKRAGLSQSLSRGKWCLTPAGFDWVASHPQPMTEQETNHLAFAFVNVKLKSRPDAVDLDPKADSPDHEELAKSSPDDRLDQALKELRDAVADEVLENLLQVSPSRFEVIVLDVLHRLGYGGHRDDLQRVGGTGDGGIDGVISLDKLGLEKVYVQAKRWQNTVGRPELQAFYGALAGQKAKRGVFITTSGFTSQARDFAQSVEGMVLVDGERLVHLMIENEVGVSSRLLKVPKLDMDYFE
5511202300100020023333101032012000311203321123123222110100000000102211002213302010022012101221232022102200110111223233322323232322333322422132102201320132003201310231122101200110033111213221021022213110000001142221100010221343122310120000012231220000001201230111022131000010320020023132222221020120233224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTVPTYDKFIEPVLRYLATKPEGAAARDVHEAAADALGLDDSQRAKVITSGQLVYKNRAGWAHDRLKRAGLSQSLSRGKWCLTPAGFDWVASHPQPMTEQETNHLAFAFVNVKLKSRPDAVDLDPKADSPDHEELAKSSPDDRLDQALKELRDAVADEVLENLLQVSPSRFEVIVLDVLHRLGYGGHRDDLQRVGGTGDGGIDGVISLDKLGLEKVYVQAKRWQNTVGRPELQAFYGALAGQKAKRGVFITTSGFTSQARDFAQSVEGMVLVDGERLVHLMIENEVGVSSRLLKVPKLDMDYFE
1	SPARKS	1fp2a	0.101	0.911	1.024	threading_1	MSL--KWAVEMNIPNIIQNHGKPISLSNLVSIL----QVPSSK------------IGNVRRLMRYLAHNGFFEIITKESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGDFLDKNPEYNTSFNDAMASDSKLINLALRDCD-FVFDTTAKIICETF----PKLKCIVFNLSGSNNLTYVMFTSIPNADAVLLKLHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIKKKDENQVTQIKLACLNGKERNEEEWKKLFIEAGF----QHYKISPLTGFLIE
2	PROSPECT2	1m5ya	0.091	0.944	1.365	threading_2	VDESDVDGLMQSVKLNAAQARQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNM----------TLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSARIQELPGIFAQALSTAKKGDIVGPIRS--GVGFHILKVNDLRGESKNVHARHILLKPSPIMTDEQARVKLEQIAADIKS-----GKTTFAAAAKEFSQDPGSLGWATPDIFRDALTRLNKGQMSELLDTRNVDRKILS
3	PROSPECT2	1fp2a	0.093	0.918	1.358	threading_3	RKPSEIFKAQALIPNIIQNHGKPISLSNLVSIL----QVPSSKIG------------NVRRLMRYLAHNGFFETKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHEKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALR-DCDFVFDTTAKIICETFP----KLKCIVFNLSGSNNLTYVGGDMFTSIPNAAVLLKYILHNWTDKDCLRILKKCKDGKRGKVTIIDKKKDENQVTQIKLLMDVNMARNEEEWKKLFIEAGFQ----HYKISPLTGFLYP
4	HHPRED-l	1y88_A	0.168	0.431	4.899	threading_4	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYFQGMVARLLEEHGFETK-TNVIVQGNCVEQEIDVVAERDG---ERYMIECKFHNIPVYTGLKEARFLDVEKHGFTQPWIFTNTKFSEEAKKYAGC-VGIKLTGKEGIEVLLESKGLYITILRIDKEVLRAEKL-
5	PROSPECT2	1d3ga	0.108	0.947	1.239	threading_5	MATGDERFYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPFQDSDMLERVLGHKFRNPVEAVDGLYKMGFGFGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLELRRLLTKVLQERDGLRRSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQG-----ALRSETGGLSGKP------LRDLSTQTIREMYALTQGRVPIIGVGGVSSQDALEKIRAGASLVQLYKRELEALLKEQGFGGVTDA-----IGADHRR
6	HHPRED-g	1y88_A	0.167	0.434	3.902	threading_6	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYFQGMVARLLEEHGFETK-TNVIVQGNCVEQEIDVVAERDG---ERYMIECKFHNIPVYTGLKYARFLDVEKHGFTQPWIFTNTKFSEEAKKYAGC-VGIKLTGKEGIEVLLESKGLYITILREVLLVFCRDVLR
7	PROSPECT2	3hosA	0.130	0.888	1.237	threading_7	V--PNKEQTRTVLIFCFHLKKT---AAESHRMLVEA------------FGEQVPTVKTCERWFQRFKSGDFDVDDKEHGKRYEDAELQALLDEDDAQTQKQLQQAVSNRLREMGKIQKVGRWVPHELN-----------------ERQMERRKNTCEILLSRYKRKSFLHRWIFFVNPKRKKSYVDPGQPATSTARPNRFGKKTMLCVWWDQSGVIYYELLKPGETVNAARLINLNRALQRKRPEYRVIFLHDNAARAVRDTLETLNWEVLPSYESVKKWLDEWFAAKDDEFYKCVASDGKYFE
8	SAM-T99	1y88A1	0.200	0.296	1.120	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMVARLLEEHGF-----ETKTNVIVQGQEIDVVAERDG---ERYMIECKFHNIPVYTGLKEAMYTYARKHGFTQPWIFTNTKFSEEAKKYAGCVG-IKL---------------------------------
9	SAM-T99	1y88A	0.200	0.296	1.082	threading_9	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMVARLLEEHGF-----ETKTNVIVQGQEIDVVAERDG---ERYMIECKFHNIPVYTGLKEAMYTYARKHGFTQPWIFTNTKFSEEAKKYAGCVG-IKL---------------------------------
10	PROSPECT2	1zg3A	0.086	0.918	1.221	threading_10	GSYHAQIHLYLGIADAIHNHGKPMTLSEL----ASSLKLHPSKVN------------ILHRFLRLLTHNGFFAEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQEN-KRVFEGVTKLIHEIFP----HLKCTVFNLTGNENLNFVGGDMFKSIPSAAVLLKWVLHDWNDEQSLKILKNSKEAISHIDISIDETSDDRGLTELQLDMFLGKERTKQEWEKLIYDAGFS----SYKITPISGFKYP

Predicted Tertiary Structure


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TM-score=0.789 to 1fpxA SCOP code=a.4.5.29	TM-score=0.490 to 1m5yD SCOP code=a.223.1.2	TM-score=0.726 to 1fpxA SCOP code=a.4.5.29	TM-score=0.566 to 1y88A SCOP code=a.60.4.3	TM-score=0.728 to 2prmA SCOP code=c.1.4.1