Template-based Modeling Results for MRP_ECOLI

Submitted Primary Sequence

>Length 369
MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAWMDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPGINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAWMDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPGINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEECCEECCCEEEEEEECCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAWMDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPGINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV
554333242330022101100230312213330120300110202332020101011221210330131012102412212101020112223244243332143020000000031110100000000000122312000000100000002001033331213322200002220000000000033310000100100300020032011210000000001010211010022032110000001220011002200200230302000001100111013012111001321021002313020002010112012214411000022231300100220022002102332422323110222
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAWMDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPGINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV
1	MUSTER	2ph1A	0.381	0.640	2.131	threading_1	--------------------------------------------------------------------------------------------RVTDEEIKERLGKIKSRIAVS-GKGGVGKSTVTALLAVHYARQGKKVGILDADFLGPSIPILFGLRNARIAV-SAEGLEPVQKYGIKVS-QFLLPKENTPVIWRGPLIAGIREFLGR-VAWGELDHLLIDLPPGTGDAPLTVQDAKP-TGVVVVSTPQELTAVIVEKAINA-EETNTSVLGLVENS-YFVCPNCGHKSYIFGEGKGESLAKKYNIGFFTSIPIEEELIKLADSGRIEEYEKDE----------------------------------
2	SPARKS	2veda	0.189	0.661	3.062	threading_2	---DKRIKDEEDVEKELLPVLGSIQKFNMTN-------------TRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPD-------------------------SAVQSIVITSEAPGAGMSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNEGWSTYQDSIISTEIEDLDVLTSGPIPPNPSELIT-----SRAFANLYDT-LLMNYNFVIIDTPPVNTVTDAQLFSKF-TGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNR--MPKDKSASYYAYYG---------------------------------------------------------------------------
3	SPARKS	2ph1a	0.385	0.648	3.728	threading_3	--------------------------------------------------------------------------------------------RVTDEEIKERLGKIKSRIAV-SGKGGVGKSTVTALLAVHYARQGKKVGILDADFLGPSIPILFGLRNARIVSAEGLEPVLTQKYGIKV-SQFLLPKENTPVIWRGPLI-AGIREFLGRVAWGELDHLLIDLPPGTGDAPLTVQDAKP-TGVVVVSTPQELTAVIVEKAINAE-ETNTSVLGLVENS-YFVCPNCGHKSYIFGEGKGESLAKKYNIGFFTSIPIEEELIKLADSGRIEEYEKDWFE--------------------------------
4	PROSPECT2	2ph1A	0.368	0.648	2.936	threading_4	RVT----------DEEIKERL----------------------------------------------------------------------------------GKIKSRI-AVSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLGPSIPILFGLRNARIAV-SAEGLEPVLTQKYGIKVSQFLLKENTPVIWRGPLI-AGIREFLGRVAWGELDHLLIDLPPGTGDAPLTVQD-AKPTGVVVVSTPQELTAVIVEKAINA-EETNTSVLGLVENS-YFVCPNCGHKSYIFGEGKGESLAKKYNIGFFTSIPIEEELIKLADSGRIEEYEKDWFE--------------------------------
5	PPA-I	2ph1A	0.372	0.648	6.030	threading_5	--------------------------------------------------------------------------------------------RVTDEEIKERLGKIKSRIAVS-GKGGVGKSTVTALLAVHYARQGKKVGILDADFLGPSIPILFGLRNARIAVSAEGLEPLTQKYGI-KVSQFLLPKENTPVIWR-GPLIAGIREFLGRVAWGELDHLLIDLPPGTGDAPLTVQDAKP-TGVVVVSTPQELTAVIVEKAINA-EETNTSVLGLVENS-YFVCPNCGHKSYIFGEGKGESLAKKYNIGFFTSIPIEEELIKLADSGRIEEYEKDWFE--------------------------------
6	HHPRED-l	1hyq_A	0.247	0.626	2.963	threading_6	----------------------------------------------------------------------------------------------------------VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEGLPVTLQNVLAGARIDEAIYVGPGGVKVVPAGVSLEGLRKANPEKLEDVLT-QIMESTDILLLDAPAGLERS--AVIAIAAAQELLLVVNPEISSITDGLKTKIVAERLGTKVLGVVVNRITTLG---I-------EMAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYIA-------------------
7	HHPRED-g	1g3q_A	0.251	0.637	2.860	threading_7	---------------------------------------------------------------------------------------------------------MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVTLHDVAGEANVEDAIYMTQFDNVYVLPGAVDWEHVLKADPRKLPEVIKSLKDKFDFILIDCPAGLQLD--AMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRYG-------RSDR----DIPPEAAEVMEVPLLAVIPEDPAIREGTLEGIPAVKYKPESKGAKAFVKLAEEI-EKLA---------------
8	SP3	2ph1a	0.372	0.648	3.742	threading_8	--------------------------------------------------------------------------------------------RVTDEEIKERLGKIKSRIAV-SGKGGVGKSTVTALLAVHYARQGKKVGILDADFLGPSIPILFGLRNARIAV-SAEGLEPVLTQKYGIKVQFLLPKENTPVIWRGPLI-AGIREFLGRVAWGELDHLLIDLPPGTGDAPLTVQDAKP-TGVVVVSTPQELTAVIVEKAINAE-ETNTSVLGLVENS-YFVCPNCGHKSYIFGEGKGESLAKKYNIGFFTSIPIEEELIKLADSGRIEEYEKDWFE--------------------------------
9	SAM-T99	2ph1A	0.389	0.621	8.196	threading_9	----------RVTDEEIKERLGKIKSRI-----------------------------------------------------------------------------------AVSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLGPSIPILFGLRNARIAVAEGLEPVLTQKYGIKV-SQFLLPKENTPVIWRGPLIAG-IREFLGRVAWGELDHLLIDLPPGTGDAPLT-VQDAKPTGVVVVSTPQELTAVIVEKAINA-EETNTSVLGLVEN-SYFVCPNCGHKSYIFGEGKGESLAKKYNIGFFTSIPIEEELIKLADSGR------------------------------------------
10	MUSTER	1hyqA	0.253	0.610	1.789	threading_10	---------------------------------------------------------------------------------------------------------V-RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEGLPVTLQRIDEAIYVGPGGVKVVPAGVSLEGLRK--ANPEKLEDVLTQIME-----STDILLLDAPAGLERSAVIAIAAA--QELLLVVNPEISSITDGLKTKIVAERLGTKVLGVVVNRITTLGIEM----------AKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYIA-------------------

Predicted Tertiary Structure


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TM-score=0.601 to 1ionA SCOP code=c.37.1.10	TM-score=0.542 to 1hyqA SCOP code=c.37.1.10	TM-score=0.613 to 1ionA SCOP code=c.37.1.10	TM-score=0.611 to 1ionA SCOP code=c.37.1.10	TM-score=0.623 to 1ionA SCOP code=c.37.1.10