Template-based Modeling Results for MRED_ECOLI

Submitted Primary Sequence

>Length 162
MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ
542231313100000000000020000131021010100000000000001230100000000000000100110000000000000001101001102100100000000000100100010001212120200010001000000000002211121234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ
1	PROSPECT2	1t33A	0.130	0.951	1.101	threading_1	MNIPTTTTKYLACAQWIADFLGEKFSQPAPDRDAIRELILLACKNMIMLLTQE---DTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLT-----Q
2	PPA-I	1t33A	0.077	0.957	1.047	threading_2	ACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDMILHTHALLGEVLAFRLGKETILLRTGWPQFD--EEKAELIYQTVTCHIDLILHGLTQ-----
3	PPA-I	1pw4A2	0.096	0.969	1.009	threading_3	QYVLPNKLLWYIAIANVFVYLLRY-----GILDWSPTYLKLDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKFTGLFGYLGGSVAASAIVGYTVDFFGWDGGF
4	MUSTER	3p5nA	0.141	0.920	0.890	threading_4	-----QQNKRLITISMLSAIAFVLTPIPFLPPYLTSDVPSLLATF-----P--AGIIVALVKNLLNYLFSMDPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLSILNYFVLLPLYGSGIIPFNIIKGIVISIVFILLYRRLANF-LK
5	SPARKS	2wuda	0.095	0.846	0.843	threading_5	SDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGN-ALGGGTAVRFALDYPARAG-------RL---VLMGPG--------------GLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGA
6	PROSPECT2	1oyzA	0.080	1.000	0.987	threading_6	YQKRKASDKNYIRRDIGAFILGQIKICKKCEDNVKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVTIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSVLSVLCDELTSAIDKLKRS
7	PPA-I	3p5nA	0.127	0.969	0.998	threading_7	-----QQNKRLITISMLSAIAFVLTPIPFLPPYLTLDFSDVPSLLATFTFGPVAGIIVALVKNLLNYLFSMGPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLSILNYFVLLPLYGSGIIPFNIIKGIVISIVFILLYRRLANFLKR
8	HHPRED-l	3f7c_A	0.130	0.426	0.763	threading_8	--------------------------------------------------------------------------------------NANQFLKAVSQLQGWRECAFL--LALAERSFPNYALFADAVGLKTGGK-RQLLD--LAWD-LQKDLSKLETLCGV-
9	HHPRED-g	3p5n_A	0.141	0.877	0.853	threading_9	-------NKRLITISMLSAIALTFFPPFLP-PYLTLDFSDVPSLLATFTFGPVAGIIVALVKNLLNYLFSGDPVGPNFLAGASFLLTAYAIYKNK--RS-TKSLITGLIIATIMTIVLSILNYFYGM----KVIIKGIVISIVFIL----LYRRLANFLK-R
10	SP3	2xwub	0.094	0.981	0.528	threading_10	LMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPY-IQQLEKLAEEIPNLAIVHILGLLSNLFTTLDISHPNPVVVVLQQVFQLIQKVLSKWL-NDAQVVEAVCAIFEKSVKTLLDDFAPMV-PQLCEMLGRMYSTIPQASALDLTRQLVHIFAHE

Predicted Tertiary Structure


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TM-score=0.830 to 1t33A SCOP code=a.4.1.9	TM-score=0.853 to 1t33A SCOP code=a.4.1.9	TM-score=0.819 to 1pw4A SCOP code=f.38.1.1	TM-score=0.495 to 1tuaA SCOP code=d.51.1.1	TM-score=0.863 to 2fbqA SCOP code=a.4.1.9