Template-based Modeling Results for MREB_ECOLI

Submitted Primary Sequence

>Length 347
MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE
CCHHHHHHHHHHEEEECCCHHEEEEECCCCEEEECCEEEEEECCCCCCCCEEEEECHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE
32330111001000000000000000233110121100000223422232100000220132023012101000003311100020013002200210232212331010000000201311120022003302121000021000000102032332110000000110010000002100011103110220020002001421102102200220121012013233222010202212420011020103201300320021002101200340123002101420000010000032012001321312011031011000200020020022222322344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE
1	MUSTER	1jcfA	0.533	0.963	3.636	threading_1	-------MLRKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDST----TGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAKGGMNLF-KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKEELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILKKLQGAG-
2	SPARKS	1jcfa	0.533	0.963	7.477	threading_2	-------MLRKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDST----TGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAK-GGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKEELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILKKLQGAG-
3	PROSPECT2	1jcfa	0.535	0.960	5.479	threading_3	ML-------RKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTGE----ILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAKGGMN-LFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILKKLQ--GA
4	PPA-I	1jcfA	0.533	0.963	8.991	threading_4	-------MLRKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDST----TGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAKGGMNLF-KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKEELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILKKLQGAG-
5	HHPRED-l	1yuw_A	0.211	0.942	4.778	threading_5	--------MSPAVGIDLGTTYSCVGVFQHGKVETTPSYVAFTDTE-------RLIGDAAKNQVAMNPTNTVFDAKRLIGRFYPEEVSSMVLTK-MKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAERNVLIFDLGGGTFDVSILTIAAGITAGDTHLGGEDFDNRMVNHFIAEFKRKHKKRAVRRLRTACRAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDK-S--QIHDIVLVGGSTRIPKIQKLLQDFFNKELNKSINPDEAVAYGAAVQAAILSGDKSENVQD-
6	HHPRED-g	1jce_A	0.533	0.931	5.056	threading_6	----------KDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTG----EILKVGLEAKN-IGKTPATIKAIRP-RDGVIADYTVALV-LRYFINKAKGG-NL-FKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEP-AAAIGSNLNVEEPSGN-VVDIGGGTTEVAVISLGSIVTWESIRIAGDE-DEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKEELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAG-VLDKVNILKKLQGAG-
7	SP3	1jcfa	0.533	0.963	7.220	threading_7	-------MLRKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDST----TGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAK-GGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKEELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILKKLQGAG-
8	SAM-T99	1jcfA	0.536	0.963	9.927	threading_8	-------MLRKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTG----EILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAKGGM-NLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKENDELEVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILKKLQGAG-
9	MUSTER	3h1qB	0.243	0.772	2.243	threading_9	---------SNELEQKLNLLNDLIVREIVN-PLPPPYKVGVDLG----TADIVLVVTDQEGI--PVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVER-LLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN-----DGIVVDIGGGTTGIAVIEKGKITATFDEPTGGTHLSLVLAGSYK------IPFEEAETIKKDFSR---------------------HREI-----RVVRPVIEKALIVKEVIKNY-DQTLP----------VYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIALFG--------------
10	SPARKS	3h1qa	0.240	0.755	3.777	threading_10	---------NAELEQKLNLLNDLIVREIVN-PLPPPYKVGVDL----GTADIVLVVTDQEGI--PVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVER-LLGSELFQAATAIPPGTN---AEACGHVVAGAGLELVTLVDEPVAAARALGIN-----DGIVVDIGGGTTGIAVIEKGKITATFDEPTGGTHLSLVLAGS------YKIPFEEAETIKKDFSRH-------------REI------------RVVRPVIEK-----ALIVKEVIKNYDQTL-------PVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIG-----------------

Predicted Tertiary Structure


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TM-score=0.977 to 1jcfA SCOP code=c.55.1.1	TM-score=0.977 to 1jcfA SCOP code=c.55.1.1	TM-score=0.978 to 1jcfA SCOP code=c.55.1.1	TM-score=0.974 to 1jcfA SCOP code=c.55.1.1	TM-score=0.977 to 1jcfA SCOP code=c.55.1.1