Template-based Modeling Results for MPRA_ECOLI


  Submitted Primary Sequence

>Length 176
MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS
55332122220021113424312221010010012002201310231043220221100000002123332021120011010131101200210252110212213422200001003301300220131022002301320222113202300220022024134321223125
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS
1MUSTER2fbkA0.2260.8812.261threading_1--DTAALLERIRSDWARLNHGPSAGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIER-------REASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
2SPARKS2fbka0.2190.8812.917threading_2--DTAALLERIRSDWARLNHGPSAGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLI-------ERREASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
3PROSPECT22fbkA0.2190.8812.236threading_3--DTAALLERIRSDWARLNHGPSAGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYSAPPEGLRPTELSALAAISGPSTSNRIVRLLEKGLI-------ERREASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLE------------Q
4PPA-I2fbkA0.2260.8812.393threading_4--DTAALLERIRSDWARLNHGPSAGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIER-------REASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
5HHPRED-l2fbk_A0.2400.8522.079threading_5---DTALLERIRSDWARLN----AGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIERRE-------ASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
6HHPRED-g2fbk_A0.2430.8412.509threading_6---DTALLERIRSDWAG------AGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIERRE-------ASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
7SP32fbka0.2190.8813.039threading_7--DTAALLERIRSDWARLNHGPSAGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLI-------ERREASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
8SAM-T992a61A0.2350.7502.702threading_8------------------------------RILREICFMVKVEGRKVLRDFGITPAQFDILQKIYFEG--PKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIEKVIERRENFIEKITSDLGKEKSSKILDYLKELKGVMER------------
9MUSTER3gfiA0.1890.8122.087threading_9---------------------SNENRIQIMSTIAKIYRAMSRELNRRLGELNLSYLDFLVLRATS---DGPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETFNKGIEIYKKLANEVTGDLSEDEVILVLDKISKILKRIEEISQ---------
10SPARKS2yr2a0.1900.8072.831threading_10----------------------NENRIQIMSTIAKIYRAMSRELNRRLGELNLSYLDFLVLRATSDGP---KTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETFNKGIEIYKKLANEVTGDLSEDEVILVLDKISKILKRIEEISQ---------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.855 to 2fbkA
SCOP code=a.4.5.28
TM-score=0.855 to 2fbkA
SCOP code=a.4.5.28
TM-score=0.814 to 2fbkA
SCOP code=a.4.5.28
TM-score=0.845 to 2fbkA
SCOP code=a.4.5.28
TM-score=0.855 to 2fbkA
SCOP code=a.4.5.28