Template-based Modeling Results for MLTF_ECOLI

Submitted Primary Sequence

>Length 518
MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGELRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGELRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCEEEEEEECCCCEEEECCCCEEEHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGELRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN
43221111000000000000000111322242333121023311010001111120012322010010100220033031202010232022003102322000000011212311331321211111000001222334232122034120000212201200210132313312120222321220021023230100000010011013223311001212343210000123223200110220122132212002012201121331321212001211122122022002200420111000000022022213121221020001002200331203232102200200020021003302320233110000000010011001101110342521131101012001110131012302212020110010021014001001011223233123211321332222232322434110120022112222222222222432333345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGELRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN
1	MUSTER	2yjpA	0.202	0.467	1.060	threading_1	--------------------------------AATVAAIKEKGVIRIGVDKPPFGYVDANGKNQGFDVEIAKDLAKDLLDKVEFVLT-EAANRVEYVRSGKVDLILANFTQTPERAEAVDFADPYMKVALGVVSPKNKP-ITDMAQLKDQTLLVNKGTTADAFFTKSHPE------VKLLKFDQNTETFDALKDGRGVALAHDNALLWAWAKENPNFEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEK-VKPEALL--AE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	1qsaa	0.143	0.836	1.823	threading_2	PGTTEAQCNYYYAKWNGAKELWLTGKSQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGN-----TGLVTVLAGQMPASAIISLANNPNTVLTFARTTGATDFTRQMAAVPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTRRGLNTWLARLPMEALLERGREAEAKEILHQLMQQR------GFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGWNLDNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHFPLAYNDLFKRYTSGIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTSPGQLLDPETNINIGTSYLQYVYQQFGNN------RIFSSAAYNAGPGRVRTWLGNS---AGRIDAVAFVES------------------IPFSETRGYVKNVLAYDAYYRYF-----------------------------------------------MGDKPTLMSATEWGRRY
3	HHPRED-l	1qsa_A	0.165	0.809	2.568	threading_3	ARTLQSRFVLTEAQCNY-YYAKWN----TGQSEEAWQGAKE--LWLTGKSQPNASVWRASGKQDPLNTGLVTVLAGQMPADYQ-----TIASAIISLANNPNTVLARTTGATDSLAQAQQLNEDQIQELRDIVMGNDVTDQAKWRDMRSQSMALGTG-DRRGLNTWLAR-LPMEAK------EKDEWRDLLLERGREAEAKMRGFYPMVAQRIGEEYELKIDKAPQNVDS-AL--TQGPEMARVRRSEWANLKSKTEQAQLA-RYAFNNQWWDLSV-QATIDHLEERFLAYNDLFKRYTSEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHFSIPQLLDPETNINIGTSYLQYVYQQFGNN------RIFSSAAYNAGPGRVRTWLGNSAG-RIDAVAF---VESIPF-----------------SETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWG--RRY---------------------------------------------
4	SPARKS	2ylna	0.201	0.452	3.377	threading_4	-----------------------------AISGSLIERINNKGTVTVGTTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKE-TQWDSMMAGLKAGRFDVVANQVGLTPERQATFDKSEPYSWSGAVLVAHNDSN-IKSIADIKGVKTAQSLTSNYGEKAKA--------AGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	PROSPECT2	1xt8A	0.144	0.469	1.823	threading_5	L--------------------------------NSLDKIKQNGVVRIGVDKPPFGYVDEKGNNQGYDIALAKRIAKELENKVQFVL-VEAANRVEFLKSNKVDIILANFTQTPQRAEQVDFCSPYMKVALGVAVPKDSN-ITSVEDLKDKTLLLNKGTTADAYFTQN------YPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFIDNLIIKLGQEQFFHKAYDET-------------------------------------------------------------------------------------------------LKAHFGDDVKADDVV------------------------------------------------------------------------------------------------------------------------------------------IEG
6	PPA-I	2q89A	0.161	0.481	1.796	threading_6	------------------------------RDENKLEELKEQGFARIAINEPPFTAVGADGKVSGAAPDVAREIFKRLGVADVVASISEYGAMIPGLQAGRHDAITAGLFMKPERCAAVAYSQPILCDAEAFALKKGNPLGLKIADNPDAKIGAPGGGTEEKLALEAG-----VPRDRVIVVPDGQSGLKMLQDGRIDVYSLPVLSINDLVSKANDPVLAPVEGAPVYCDGAAFRKGDEALRDAFDVELAKLKESGEFAKIIEPYGFSAKAAMSTTREKLCAAK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	HHPRED-l	1xt8_A	0.145	0.467	2.781	threading_7	--------------------------------LNSLDKIKQNGVVRIGVFKPPFGYVDEKGNNQGYDIALAKRIAKELFNKVQFVLVE-AANRVEFLKSNKVDIILANFTQTPQRAEQVDFCSPYMKVALGVAVPKDS-NITSVEDLKDKTLLLNKGTTADAYFTQ----NYPNIK--TLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKDHPDFKMGIELGNKDVIAPAVKK-GDKELKEFIDNLIIKLGQEQFFHKAYDETLKAHFGDDVKADDVVIE-G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	HHPRED-g	1xt8_A	0.157	0.467	2.295	threading_8	--------------------------------LNSLDKIKQNGVVRIGVFGPPFGYVDEKGNNQGYDIALAKRIAKELFNKVQFVLVE-AANRVEFLKSNKVDIILANFTQTPQRAEQVDFCSPYMKVALGVAVPKDSN-ITSVEDLKDKTLLLNKGTTADAYFTQ----NYPNIKTLKYD--QNTETFAALMDKRGDALSHDNTLLFAWVKDHPDFKMGIELGNKDVIAPAVKKG-DKELKEFIDNLIIKLGQEQFFHKAYDETLKA--HFGD-D-----VKADDVVIEG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	SP3	2ylna	0.201	0.452	3.349	threading_9	-----------------------------AISGSLIERINNKGTVTVGTTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKE-TQWDSMMAGLKAGRFDVVANQVGLTPERQATFDKSEPYSWSGAVLVAHNDSN-IKSIADIKGVKTAQSLTSNYGEKAKA--------AGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	SAM-T99	2ylnA	0.199	0.427	2.883	threading_10	-----------------------------------IERINNKGTVTVGTEYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEF-KETQWDSMMAGLKAGRFDVVANQVGLSPERQATFDKSEPYSWSGAVLVAHNDSN-IKSIADIKGVKTAQSLTSNYGEKAKAA--------GAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNVKIVAPADEKVGSGLIVN-KGNDEAVAKFSTAINELKADGTLKKLGEQFFG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.697 to 1xt8B SCOP code=c.94.1.1	TM-score=0.716 to 1slyA SCOP code=a.118.5.1	TM-score=0.638 to 1wdnA SCOP code=c.94.1.1	TM-score=0.690 to 1slyA SCOP code=a.118.5.1	TM-score=0.630 to 1slyA SCOP code=a.118.5.1