Template-based Modeling Results for MLTD_ECOLI

Submitted Primary Sequence

>Length 452
MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMPDS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMPDS
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCHHCCCCCCCCCCCCEEECCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMPDS
43010000000000002122323332322222232322322232422332222121220011003203121231330221122114232201100210210021010103333121200000002021113020112010011001100221113222212232002000100020022004201000000000110030101200421323232221221102320121012001001112113212231111120210122212221202200220202121022012202221112222210001331012132211101111132222233222211112032232021003312021310231141322303301101001222233223323201021242110110043110203001301212220330120101143442485
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMPDS
1	MUSTER	3lewA	0.113	0.898	0.663	threading_1	--FGKTGDAEKVLNGG----NYLETFNSYANPGYGALRANDAGSDVVLNSKYG------FRTHNE-FSAIYGKGGTNTLSWLLAYRVINDCNGVLDNIDADRNRIKGQALA----RGFLYLHLASC-YSFAIDKDPDAVCA--IY----TQSTETIAAEGKPASSVSEVYAQSINDLEEALELIPETYV------RDAKHKIDNEVVLGI---LSRACLYARQWEKAKTYSDKLLAKDNYLTESEYKAGFNSVDNKEWIWGHAQTQSNASYQFHYLDTTTKGSYYYSFNVDPYFRDLFEDGDYRKELFWATDPGADVESAAYVWRNSKFRFRDIENQLGDIVLRAHLNDKLNDLKTARGAKLIDIIRNQTVVRNAYPEGPIDYIYTDQTHTLKKKTQGHRFFNFPDKSAFCPNSKYY-ITDSEELA-----KNLYKDHKLSIYTK-------
2	SPARKS	1qsaa2	0.209	0.361	2.793	threading_2	--------------------------------------------------------------------------------------------------LAYNDLFKRYTSGKEIPSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PROSPECT2	3lewA	0.087	0.838	1.509	threading_3	FGKTGDAEK--VLNGGWNYLETFNSYANPGYGALRANDAGSDVVLNSKYGF----------RTHNEFSAIYGKGGTNTLSWLLAY-----------RVINDCNGVLDNIDAAEGTQADRNRIKGQASFAIDKDPDAVCAPIYTQSTETIAA-------EGKPASSVSEVYAQSINDLEEALELIPETDNEVVLGI------LSRACLYARQ------------WEKAKTYSDKLLAKDNYLTESEYKAGFNSVDNKEWIWGHAQTNDQSNASYQFHYLDTT---------------TKGSYYYSFNVDPYFRDLFEDGDYRKELFWATDPGADVESAAYVWRNSKFRFRDLNDLKTARGLSQQDLLETQTVVRNAYPEGPIDYIYTDQTHTLKKKTQGHRFFNFPDKSAFCPNSKYYRITDSEELANKNLYKD----------HPKLSIYTK
4	PPA-I	2y8pA	0.157	0.367	1.000	threading_4	--------------------------------------------------------------------------------KHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVPQLITAIIAIESGGNPNAVSKSNAIGLMQLKRDVYRRMGWSGEPTTSELKNPERNISMGAAYLNILETGPLAGQYALVVSYANGAGALLRTFSSDRKKAISKHVARNHPAPQAPRYIYKLEQALDAMLEHHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	1qsa_A	0.175	0.558	5.476	threading_5	AEAKEILHQYPMVAAQRIGEEYELKIDKAP---QNVDSALTQGPEMARVREYWNLDNSEWANLVKS--K---SKTEQAQLARYAFNNQWWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMIARQESAWNPKVKSPVGASGLMQIMPGTATHTSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGR-IDAVAFVESIPSETRGYVKNVLAYDAYYR--YFMGDKPTLM-SATE-------------------------WGRR---Y----------------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-g	2y8p_A	0.175	0.367	4.280	threading_6	--------------------------------------------------------------------------------KHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITIIAIESGGNPNAVSKSNAIGLMQLKASTSGRMGWSGEPTTSELKNPERNISMGAAYLNILETGLAGLQYALVVSYANGAGALLRTFSSDRINDLDADEFLENHPPQAPRYIYKLEQALDAMLEHHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	SP3	1qsaa2	0.209	0.361	2.825	threading_7	--------------------------------------------------------------------------------------------------LAYNDLFKRYTSGKEIPSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFYSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SAM-T99	1slyA	0.224	0.345	3.286	threading_8	------------------------------------------------------------LWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIAR---------------------------QESAWNPKVKSPVGASGLMQIMPGTAKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGLGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAYYRY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	3i4gA	0.133	0.912	0.649	threading_9	WN---ESNAELALTSLYRGSLTDGVEYNPSDWWSYHGIEHLSDNAFDRRGENN----PFFKISSGNLT---ADNAFIKRYWETSYKRIGYCNRFLVGIQTQYFYLASYFK--NVPLVENVLTGEEANNVTKT-SQA----ILKWCVTEFTAA-LPRFSAIPAGEAGRACKQAALAFLGRTC--LQKDWKSGAKAFHD-----------LGDNAINANYQELFYPSTGIQYLE-LGTGLPQHALSAKDGGWSLVNPAADLYESYEFKDGTPFSYDDPRYDPS-NLGKDRDPRLDYTIYYNGAITEYKSPDYSAAKKEKLDYTSEASREESTPINDVQSANGLTPVIRYAEGYLECLVEDNITQGILDEINAVRG---RAS----VNPPVTEVTPAKLREIVRWDIRWGIAHEVLSQKWGAPYPGSTQYATTTKEVDPTGNYRWYVGKRAFRNP
10	SPARKS	1qsaa	0.163	0.571	2.039	threading_10	QRGFYPMVAAQRI---GEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.650 to 3ck9B SCOP code=a.118.8.6	TM-score=0.693 to 3ck9B SCOP code=a.118.8.6	TM-score=0.576 to 1slyA SCOP code=a.118.5.1	TM-score=0.611 to 3ck9B SCOP code=a.118.8.6	TM-score=0.489 to 1slyA SCOP code=a.118.5.1