Template-based Modeling Results for MIPA_ECOLI

Submitted Primary Sequence

>Length 248
MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDTDVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLISTGITYKF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDTDVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLISTGITYKF
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEEEEEECCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEECCEEEEEEEEEEECCCCCCEEEEEEEEEEEEECCEEEEEEEEEEECCCCHHHEECCCCHHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEEEEEECCCCHHCCCCEEECCEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDTDVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLISTGITYKF
43111000000000000000223120000000000221244232100000000020100102012000001232201000000001221323322232023033231101000000010210101010000014213000010000020111101000000001113211001010222101312142121420000001000001012100000001011023213202001222101000000031
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDTDVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLISTGITYKF
1	MUSTER	2x27X	0.161	0.778	0.985	threading_1	----------------DIQGHKAGDFIIRGGFATVDPDDSSSDIKLAKQRGTKATVDSDTQLGLTFTYMF--ADKWGVELVAATPFNH-------QVDVKGLLD-------GKLADIKQ--LPPTLLLQYYPMGGTNS--------------AFQPYGGLGVNYT------TFFDEDASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIPSALGVNKTKVD-DPWVYMIGFGYKF
2	SPARKS	2f1ta	0.130	0.649	1.090	threading_2	-----------------------------------------------------------------------EAGEFFMRAGSATVRPTEGGGFS----------VTNNTQLGLTFTYMATDLLAATPFRHKIGTRATGDIATVHHLPPTLMAKFRPYVGAGINYT------TFFDNGNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDINYKLGGAQQHDSVRLWVFMFSAGYRF
3	PROSPECT2	1uynX	0.093	0.907	1.512	threading_3	AATVYADSTAAHADMQGRRHNGTGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLWSENSANAKTDSISLFAGIRHDAGDI----------------GYLKGLFSYGRYKNSISRSTGADENGTLMQLGALGGVNVPTGDLTVEGGLRY-------DLLKQDAFAEKGSALGWSGNSLTEGGLAGLKLSQPLSDKAVLFATAGVERDLNGRDYTVVEFGNGNHSGRVGVGYRF
4	PPA-I	2k0lA	0.122	0.730	1.717	threading_4	---------------------------------------------------------ARIMKAIFVLNAAPKDNTWYAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGYQVNYLGFEMGYDWVDNGAFKAQGVQLTAKLGYPITDLDIYTRLGGMVWRADSKGN--------YASTGVSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWVNNIGDAGTVGT--RPDNGMLSLGVSYRF
5	HHPRED-l	3nb3_A	0.178	0.544	3.179	threading_5	-------------------APKDNTWYTGAKLGWSQ------------------HENKLG-AGAFGGYQVN--PYVGF--EMGYDWLGR--MPY--------------------------------------AYKAQGVQLTAKLGYPI-TDDLDIYTRLGGMVWRADTYSNVYG-------------KNHDTGVSPVFAGGVEYAITPEIATRLEYQWTN----------------GMLSLGVSYR-
6	HHPRED-g	3nb3_A	0.184	0.548	3.204	threading_6	-------------------APKDNTWYTGAKLGWSQ------------------HENKLG-AGAFGGYQVNP--YVGFEMGYDWLGR----MPY--------------------------------------AYKAQGVQLTAKLGYPI-TDDLDIYTRLGGMVWRADTYSNVYG-------------KNHDTGVSPVFAGGVEYAITPEIATRLEYQWTN----------------GMLSLGVSYRF
7	SP3	2f1ta	0.149	0.702	0.931	threading_7	---------------------EAGEFFMRAGSATVPTEGGGFSVTNNTQLGLTFTYMAT----DNIGVELLAATPFRHKIGT-----------------RAT---------GDIATVHHLPPTLMAQWY---FGDASS--------------KFRPYVGAGINYT------TFFDNGNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDINYKLGGAQQHDSVRLWVFMFSAGYRF
8	SAM-T99	3gbdA	0.119	0.645	0.562	threading_8	-----------------------------------------------------------YLKALGIDAIWINPHYDSPNTDNGYDIRDYRKMEDFDRLISEMKKRNMRLMIDVVINHTSDQNEWFVKSKSSKDNPYRGYYFWKDAKEGQAPNNYPSFFGGSAWQKDEKTNQYYL----HYFAK-QQPDLNWDNPKRQDLYAMLRFWLDKGVSGLRFDTVATYSK------------------------
9	MUSTER	2f1tA	0.149	0.706	0.890	threading_9	---------------------EAGEFFMRAGSATVRPTEGGG-----------FSVTNNTQLGLTFTYMATDN----IGVELLAATP-------------------------FRHKIGTRATGDIATVHHL------PPTLMAQWYFGDASSKFRPYVGAGINYT------TFFDNGNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTAAQQHDSVRLDPWVFMFSAGYRF
10	SPARKS	3kvnx	0.136	0.919	1.014	threading_10	LRAYQDELRSQWQADWENWQNVGQWRGFVGGGGQRLDFDSQDSAA-------SGDGNGYNLT---LGGSYRIDEAWRAGVAAGFYRQKLEAGAKDSDY-----RMN-SYMASAFVQYQENRWWADAALTGGYLDALGGWAFSARLGYDIAQQPWHLSPFVSADYARVEVD----GYSEKGASATALDYDDQKSSKRLGAGLQGKYAFGSDTQLFAEYAHEREYEDLNSLPYTPQDHLNRVSLGFSQKL

Predicted Tertiary Structure


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TM-score=0.633 to 1p4tA SCOP code=f.4.1.1	TM-score=0.560 to 1p4tA SCOP code=f.4.1.1	TM-score=0.567 to 1p4tA SCOP code=f.4.1.1	TM-score=0.521 to 1uynX SCOP code=f.4.5.1	TM-score=0.543 to 1p4tA SCOP code=f.4.1.1