Template-based Modeling Results for MIAB_ECOLI

Submitted Primary Sequence

>Length 474
MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRVAETPESVIARTRKENDLGVGYYQP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRVAETPESVIARTRKENDLGVGYYQP
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEECCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRVAETPESVIARTRKENDLGVGYYQP
551200010100110220021003002312002103224301000000000122212200310130231144223100000000123213203430320000001211320020021033332200101123233134023222311100010120024100000001021332142123002101201432021000001001022131242220100100210130311110100101123013100200331330031010002000230032112312121021003101411230000010000012112310330030023020210000100223202012023302331132012201310221022114421221020002122442221010103210000031233121200101012123110201002233322241241232000213433322212325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRVAETPESVIARTRKENDLGVGYYQP
1	MUSTER	2qgqA	0.313	0.553	1.924	threading_1	-----------------------------------------------------------------------------------------------------------------------------------------------EERPYAYVKISDGC-------------GSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRK--QALPDLLRRLNSLNGEFWIRVYL-HPDHLTEEIISAL-ELDKVVKYFDVPVQHGSDKILKLGRTKS--SEELKKLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDKVDPE------------AKRRQEELLLLQAEISNSRLDRFVGKKLKFLVEG---KEGKFLVGRTWTEAPVVFVRGKGKIGDFLEVVIKEHDEYDWGSVI-----------------------------------
2	SPARKS	2qgqa	0.317	0.553	5.312	threading_2	-----------------------------------------------------------------------------------------------------------------------------------------------EERPYAYVKISDGC-------------GSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQA--LPDLLRRLNSLNGEFWIRVYL-HPDHLTEEIISALEL-DKVVKYFDVPVQHGSDKILKLGRTKS--SEELKKLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDKVDPEA------------KRRQEELLLLQAEISNSRLDRFVGKKLKFLVEG---KEGKFLVGRTWTEAPVVFVRGKGKIGDFLEVVIKEHDEYDWGSVI-----------------------------------
3	PROSPECT2	2qgqA	0.286	0.553	2.838	threading_3	E------------------------------------------------------------------------------------------------------------------------------------------------------------ERPYAYVKISDGCGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQ--ALPDLLRRLNSLNGEFWIRVYL-HPDHLTEEIISALEL-DKVVKYFDVPVQHGSDKILKLGRTKS--SEELKKLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDKVDPEAK------------RRQEELLLLQAEISNSRLDRFVGKKLKFLVEGK---EGKFLVGRTWTEAPVVFVRGKGKIGDFLEVVIKEHDEYDWGSV-----------------------------------I
4	PPA-I	2qgqA	0.309	0.553	9.033	threading_4	-----------------------------------------------------------------------------------------------------------------------------------------------EERPYAYVKISDGC-------------GSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRK--QALPDLLRRLNSLNGEFWIRVYL-HPDHLTEEIISAL-ELDKVVKYFDVPVQHGSDKILKLGRTKS--SEELKKLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDKVDPE------------AKRRQEELLLLQAEISNSRLDRFVGKKLKFLVEGK---EGKFLVGRTWTEAPVVFVRGKGKIGDFLEVVIKEHDEYDWGSVI-----------------------------------
5	HHPRED-l	2qgq_A	0.337	0.551	7.917	threading_5	-----------------------------------------------------------------------------------------------------------------------------------------------EERPYAYVKISDGC-------------GSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYR--KQALPDLLRRLNSLNGEFWIRV-YLHPDHLTEEIISA-LELDKVVKYFDVPVQHGSDKILKL-GRTKSSEELKK-LSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSD-----------KVDPE-AKRRQEELLLLQAEISNSRLDRFVGKKLKFLVEGKE---GKFLVGRTWTEAPEFVRGKG-KIGDFLEVVIKEHDEYD-WGSVI----------------------------------
6	HHPRED-g	2qgq_A	0.337	0.551	7.949	threading_6	-----------------------------------------------------------------------------------------------------------------------------------------------EERPYAYVKISDGC-------------GSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYR--KQALPDLLRRLNSLNGEFWIRV-YLHPDHLTEEIISA-LELDKVVKYFDVPVQHGSDKILKL-GRTKSSEELKK-LSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSD-----------KVDPE-AKRRQEELLLLQAEISNSRLDRFVGKKLKFLVEGK-EG--KFLVGRTWTEAPEFVRGKG-KIGDFLEVVIKEHDEYD-WGSVI----------------------------------
7	SP3	2qgqa	0.302	0.553	5.146	threading_7	------------------------------------------------------------------------------------------------------------------------------------------------------------EERPYAYVKISDGCGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQ--ALPDLLRRLNSLNGEFWIRVYL-HPDHLTEEIISALEL-DKVVKYFDVPVQHGSDKILKLGRTKS--SEELKKLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDKVDPEA------------KRRQEELLLLQAEISNSRLDRFVGKKLKFLVEG---KEGKFLVGRTWTEAPVVFVRGKGKIGDFLEVVIKEHDEY-DWGSVI----------------------------------
8	SAM-T99	2qgqA	0.321	0.553	6.978	threading_8	-----------------------------------------------------------------------------------------------------------------------------------------------EERPYAYVKISDGC-------------GSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYR--KQALPDLLRRLNSLNGEFWIR-VYLHPDHLTEEIISAL-ELDKVVKYFDVPVQHGSDKILKLGRTKSSEE--LKKLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYS-----------DKVDPEAK-RRQEELLLLQAEISNSRLDRFVGKKLKFLVEGKEGK---FLVGRTWTEAPVVFVRGKGKIGDFLEVVIKEHDEYDWGSVI-----------------------------------
9	MUSTER	3iixA	0.165	0.692	0.680	threading_9	-----------------------------------------------------------MTGREILEKLERREFT----------REVLKEALSINGFNEA------LFKLADEIRRKYVGD--EVHIR-------------------AIIEFSNVCRKNCLYC--GLRRNLKRYRTPEEIVERARLAVQFGAKTIVLQS----GEDPYMPD----VISDIVKEIKKM-GV----AVTLSLGEWPREYYEKWKEA---ADRYLLRHETANPVLHRKL-RPDTSFENRLNLLTLKEL--GYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKDFTLTLKMVALTRILDSNIPATTAMGTIVPGGREITL-----------RCG----NVIMPNWTPSPYRQLY------QLYPGKI-------CVFEKDTACIPVMKMIELL-GRDWGGRKRVFE
10	SPARKS	1olta	0.174	0.726	2.381	threading_10	-------------------------------------------------------------------------------------------------------------------QQIDWDLALIFSEDFGEQAFLQAVARYPERPLSLYVHIPF-CHKLCYFCGCNKIVTRQQHQYLDALEQEIVHRAPLHVSQLHWGG-------GTPTYLNKAQISRLMKLLRENFQFNADAEISVDPREIELDVLDHLRAEG--FNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTS-TNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKDLPSPQQKLDILQETIAFLTQSDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVGDCYAQNQKELKQYYQQVD----EQGNALWRGIALTRDDQWDLLFADYFAEDLKLLAPLAKDGLVDVDE

Predicted Tertiary Structure


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TM-score=0.455 to 1oltA SCOP code=c.1.28.2	TM-score=0.467 to 1jpmA SCOP code=c.1.11.2	TM-score=0.456 to 1jpmA SCOP code=c.1.11.2	TM-score=0.412 to 1tqxA SCOP code=c.1.2.2	TM-score=0.463 to 1jpmA SCOP code=c.1.11.2