Template-based Modeling Results for MEPA_ECOLI

Submitted Primary Sequence

>Length 274
MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI
CCHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI
4422010100000000110111123122222121211111020001001201232330100112322211011001002200120232111200001011221040121010111001000001013231222223323213212331331122202220010021005232010000011012200221222330023021213130000000201232230332221121210011011002233322343334223200300120034334
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI
1	MUSTER	1u10C	0.996	0.858	3.691	threading_1	-------------------ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV-RTDQRRYFGHPDLV-FIQRLSSQVSNLG-GTVLIGD--GPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAH-HVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPP--------------LPPSCQALLDEHVI
2	SPARKS	1tzpa	0.996	0.876	5.033	threading_2	-------------------ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPL---------------PPSCQALLDEHVI
3	PROSPECT2	1tzpA	0.996	0.876	5.275	threading_3	-------------------ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPL---------------PPSCQALLDEHVI
4	PPA-I	1u10C	0.987	0.858	8.215	threading_4	-------------------ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV-RTDQRRYFGHPDLV-FIQRLSSQVSNLGGT-VLIGD--GPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAH-HVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPP--------------LPPSCQALLDEHVI
5	HHPRED-l	1tzp_A	1.000	0.872	13.399	threading_5	-------------------ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEP---------------LPPSCQALLDEHV-
6	HHPRED-g	1tzp_A	1.000	0.876	11.746	threading_6	-------------------ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEP---------------LPPSCQALLDEHVI
7	SP3	1tzpa	1.000	0.876	2.279	threading_7	-------------------ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEP---------------LPPSCQALLDEHVI
8	SAM-T99	1u10C	0.974	0.858	9.674	threading_8	-------------------ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVRTDQR-RYFGHPDLV-FIQRLSSQVSNLG-GTVLIGD--GPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAH-HVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPP--------------LPPSCQALLDEHVI
9	MUSTER	3u0hA	0.133	0.876	0.684	threading_9	VDETSLVLYLDLARETVPFHWLEAEAERHGDAAVEAF---RRGLVLANLGLPLNLYD-----SEPVF----LRELSLLPDRARLCARLGARSVTAF--LWPSDEEPVRYISQL-----ARRIRQVAVLPLGRVGLEYVGPHHLRHRRYPFVQS---LADLKTFWEAI-GAPNVGALVD-----SYHWYTAGEHEDDLAQLPP----EKVVYVHINTRDAPEDAHDGKRLLPGDGRIVPFLRGLYLA-VLHETPLDGTGESRARLVRERLEK-LI
10	SPARKS	2exxa	0.105	0.938	0.615	threading_10	VDKKLVVAQGGSVARTLLEDGTFKNPRKKAAKELRLQGAVVQGDQDDQVIMALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYENIKKLTAGRLAAAHFDRDIGVPMTSVFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEVGQNIG-------LSTCRHTAEEYAALLTKHTRK------VVHDAKMTPEDYEKLGFPG----ARDLANMFRFYALRPDRDIELTLRLNPKALDQWLEQHKG

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.877 to 1u10C TM-score=0.923 to native SCOP code=d.65.1.3	TM-score=0.877 to 1u10C TM-score=0.923 to native SCOP code=d.65.1.3	TM-score=0.845 to 1u10C TM-score=0.901 to native SCOP code=d.65.1.3	TM-score=0.845 to 1u10C TM-score=0.901 to native SCOP code=d.65.1.3	TM-score=0.883 to 1u10C TM-score=0.929 to native SCOP code=d.65.1.3

Experimental Structure

Download 1tzpA

SCOP code=d.65.1.3