Template-based Modeling Results for MENE_ECOLI

Submitted Primary Sequence

>Length 451
MIFSDWPWRHWRQVRGETIALRLNDEQLNWRELCARVDELASGFAVQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQFALVPDGENTFPALTSLHIQLVEGAHAATWQPTRLCSMTLTSGSTGLPKAAVHTYQAHLASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGCTHASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFASTVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYATRDRGEMHNGKLTIVGRLDNLFFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGHRPVAVMEYDHESVDLSEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIFSDWPWRHWRQVRGETIALRLNDEQLNWRELCARVDELASGFAVQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQFALVPDGENTFPALTSLHIQLVEGAHAATWQPTRLCSMTLTSGSTGLPKAAVHTYQAHLASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGCTHASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFASTVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYATRDRGEMHNGKLTIVGRLDNLFFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGHRPVAVMEYDHESVDLSEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQQ
CCHHHHHHHHHHHHCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCHHHCCCHHHHHHHCCCCCEECCCEEEEECCEEEEEECCCCEEEECCEEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIFSDWPWRHWRQVRGETIALRLNDEQLNWRELCARVDELASGFAVQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQFALVPDGENTFPALTSLHIQLVEGAHAATWQPTRLCSMTLTSGSTGLPKAAVHTYQAHLASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGCTHASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFASTVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYATRDRGEMHNGKLTIVGRLDNLFFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGHRPVAVMEYDHESVDLSEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQQ
2411100111003221311001122120102100210110020014220241100001031012000000000100010000013023300110022020100001313321220221112113223212133221000000011222010000001000000100011020133100000000000000000000010101000133220310022001000000001100223111100000000010123002102420020010000110001000222312131111011110100111000201100201021030002012300000201010120000000112100001010000310030014023001000010114411210000021343121003002320140200110100231132122311131122114435
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIFSDWPWRHWRQVRGETIALRLNDEQLNWRELCARVDELASGFAVQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQFALVPDGENTFPALTSLHIQLVEGAHAATWQPTRLCSMTLTSGSTGLPKAAVHTYQAHLASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGCTHASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFASTVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYATRDRGEMHNGKLTIVGRLDNLFFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGHRPVAVMEYDHESVDLSEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQQ
1	MUSTER	3iplA	0.248	0.940	3.322	threading_1	--LDF-WLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRLKAYQ---QSRVGLYIDNSIQSIILIHACWLANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELGFQIVSLDDESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVDKFNAEQILTMITHISLVPQTLNWLMQQGEPYNLQKILLGGAKLSATMIETALQYNLPIYNSFGMTETCSQFLTATPERPDTVGMPSANVDVKIKNGELMIKGANVMNGYLYPTDLTG-TFENGYFNTGDIAEIDEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESSKAQLIAYLSKHLAKYKVPKHFEKVDTLP--------------------
2	SPARKS	1ulta	0.233	0.998	4.298	threading_2	LNLWDFLERAAAL-FGRKEVVSRLHHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPDEKAPEGYLAYEEALGEEADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASDGTALSEKDVVLPVVPMFHVNAWCLPYAATLVGAKQVLPPRLDPASLVELFTFTAGVPTVWLALADYLRLKTLRRLVVGGSAAPRSLIARFERMGVEVRQGYGLTETSPVVVQNFVKLKAKTGLPIPLVRLRVADGEVQLKGPWITGGYYGNEEATRSALPDGFFRTGDIAVWDEGYVEIKDRLKDLIKSGGEWISSVDLENALMGHPKVKEAAVVAIPHPKWQERPLAVVVPRGEEELNEHLLKAGFAKWQLPDAYVFAEEIPRTSAGKFLKRALREQYKNYY
3	PROSPECT2	1ultA	0.231	0.998	5.334	threading_3	LNLWDF-LERAAALFGRKEVVSRLHHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPDEKAPEGYLAYEEALGEEADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASDGTALSEKDVVLPVVPMFHVNAWCLYAATLVGAKQVLPGPRLDPASLVEGVTFTAGVPTVWLALATGHRLKTLRRLVVGGSAAPRSLIARFERMGVEVRQGYGLTETSPVVVQNFVKSKAKTGLPIPLVRLRVADGEVQLKGPWITGGYYGNEEATRSATPDGFFRTGDIAVWDEGYVEIKDRLKDLIKSGGEWISSVDLENALMGHPKVKEAAVVAIPHPKWQERPLAVVVPRGEEELNEHLLKAGFAKWQLPDAYVFAEEIPRTSAGKFLKRALREQYKNYY
4	PPA-I	3iplA	0.250	0.940	4.972	threading_4	---LDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRLKAYQ---QSRVGLYIDNSIQSIILIHACWLANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFIVSLDDESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVDKFNAEQILTMITHISLVPQTLNWLMQQGEPYNLQKILLGGAKLSATMIETALQYNLPIYNSFGMTETCSQFLTATPERPDTVGMPSANVDVKIKNGELMIKGANVMNGYLYPTDLTG-TFENGYFNTGDIAEIDEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESSKAQLIAYLSKHLAKYKVPKHFEKVDTLP--------------------
5	HHPRED-l	1pg4_A	0.171	0.998	3.288	threading_5	LNLAANCLDRHLQENGDRTAIIWESKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRATSVEHVIVKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATFKYVFDYHPGDIYWCTADVGWVTGHSLLYGPLACGATTLMFEGVTPARMCHQVNILYTAPTAIRALMAGTDRSSLRILGSVGEPINPEAWEWYWKKKCPVVDTWWQTETGGFMITPLELKAGSATRPFFGVQPALVDGNLVITDSGQARTLFGDHERFEQTTFKNMYFSGDGARRDDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGD-
6	HHPRED-g	1pg4_A	0.173	0.998	2.807	threading_6	LNLAANCLDRHLQENGDRTAIIWEGKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTKYVFDYHPGDIYWCTADVGWVTGHSYLYGPLACGATTLMFEGVTPARMCHQVNILYTAPTAIRALMAEGDRSSLRILGSVGEPINPEAWEWYWKKKCPVVDTWWQTETGGFMITPLPLKAGSATRPFFGVQPALVDGNLVITDSGQARTLFGDHERFEQTYFKNMYFSGDGARRDDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGPAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGD-
7	SP3	3nyqa	0.244	0.936	4.295	threading_7	--LFPALSPAPTGAPADRPALRFGERSLTYAELAAAAGATA--------GRIGRVAVWATPAMETGVAVVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLAPPDAELPPALGDVDVRARGAVPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLILGPLRRGGSVRHLGRFSTEGAAREATMLFGVPTMYHRIAETLALAGARLLVSGSAALPVHDHERIAAAGRRVIERYGMTETLMNTSVRADGRAGTVGVPLPGVELRLVPGEIQVRGPNLFTEYLNRPDATAAAFEDGFFRTGDMAVRDDGYVRIVGRKTDLIKSGGYKIGAGEIENALLEHPEVREAAVTGEPDPDLGERIVAWIVPADALGTLADHVAARLAPHKRPRVVRYLDAVPR-------------------
8	SAM-T99	3iplA	0.241	0.940	3.322	threading_8	---LDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACWLANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVLDDESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVDKFNAMIKNERITHISLVPQTLNWLMQQGEPYNLQKILLGGAKLSATMIETALQYNLPIYNSFGMTETCSQFLTATPERPDTVGMPSANVDVKIKNGELMIKGANVMNGYLYPTDLTG-TFENGYFNTGDIAEIDEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDKAQLIAYLSKHLAKYKVPKHFEKVDTLP--------------------
9	MUSTER	3dlpX	0.265	0.989	3.214	threading_9	QTVNEMLRRAATRA-PDHCALAVRGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIDGEPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLGRHNVVLGLMPLYHVVGFFAVLVAALA-GTYVVVEEFRPVDALQLVTSLFATPTHLDALAAAAKLDSLRHVTFAGATMPDAVLETVHQHPGEKVNIYGTTEAMNSLYMRQP-KTGTEMAPGFFSEVRIVRGELIVAASSAFVGYLNQPQATAEKLQDGWYRTSDVAVWTEGTVRILGRVPDMIISGGENIHPSEIERVLGTAPGVTEVVVIGLADQRWGQSVTACVVPRLSADALDTFCRSELADFKRPKRYFILDQLPKNALNKVLRRQLVQQVSS--
10	SPARKS	3ipla	0.250	0.940	4.184	threading_10	---LDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRLKAYQ---QSRVGLYIDNSIQSIILIHACWLANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFIVSLDDESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVDKFNAEQILTMITHISLVPQTLNWLMQQGEPYNLQKILLGGAKLSATMIETALQYNLPIYNSFGMTETCSQFLTATPERPDTVGMPSANVDVKIKNGELMIKGANVMNGYLYPTDLTG-TFENGYFNTGDIAEIDEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESSKAQLIAYLSKHLAKYKVPKHFEKVDTLP--------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.727 to 1mdfA SCOP code=e.23.1.1	TM-score=0.726 to 1mdfA SCOP code=e.23.1.1	TM-score=0.899 to 1ultA SCOP code=e.23.1.1	TM-score=0.892 to 1ultA SCOP code=e.23.1.1	TM-score=0.724 to 1mdfA SCOP code=e.23.1.1