Template-based Modeling Results for MELB_ECOLI

Submitted Primary Sequence

>Length 473
MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEGTTQIVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVFSSDNQPSAEGSHLTLKAIVALIYKNDQLSCLLGMALAYNVASNIITGFAIYYFSYVIGDADLFPYYLSYAGAANLVTLVFFPRLVKSLSRRILWAGASILPVLSCGVLLLMALMSYHNVVLIVIAGILLNVGTALFWVLQVIMVADIVDYGEYKLHVRCESIAYSVQTMVVKGGSAFAAFFIAVVLGMIGYVPNVEQSTQALLGMQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDKYRKVPPEPVHADIPVGAVSDVKA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEGTTQIVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVFSSDNQPSAEGSHLTLKAIVALIYKNDQLSCLLGMALAYNVASNIITGFAIYYFSYVIGDADLFPYYLSYAGAANLVTLVFFPRLVKSLSRRILWAGASILPVLSCGVLLLMALMSYHNVVLIVIAGILLNVGTALFWVLQVIMVADIVDYGEYKLHVRCESIAYSVQTMVVKGGSAFAAFFIAVVLGMIGYVPNVEQSTQALLGMQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDKYRKVPPEPVHADIPVGAVSDVKA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEGTTQIVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVFSSDNQPSAEGSHLTLKAIVALIYKNDQLSCLLGMALAYNVASNIITGFAIYYFSYVIGDADLFPYYLSYAGAANLVTLVFFPRLVKSLSRRILWAGASILPVLSCGVLLLMALMSYHNVVLIVIAGILLNVGTALFWVLQVIMVADIVDYGEYKLHVRCESIAYSVQTMVVKGGSAFAAFFIAVVLGMIGYVPNVEQSTQALLGMQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDKYRKVPPEPVHADIPVGAVSDVKA
55131111000000000000000000000000001001011000000000010010000000000011131321411000000000000000000002213100100000000000000000000001000120122331122000002000000000000000000210122230100100000000000000000110011112133332232232202100110130120000000000100000000000010000011213001100000000100000001200300121001000000000000000000111220000000000000000000100000000101101212222202100000000011001000000000000000112324212300100100000000000000000002103021300320122023325423332232312222223245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEGTTQIVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVFSSDNQPSAEGSHLTLKAIVALIYKNDQLSCLLGMALAYNVASNIITGFAIYYFSYVIGDADLFPYYLSYAGAANLVTLVFFPRLVKSLSRRILWAGASILPVLSCGVLLLMALMSYHNVVLIVIAGILLNVGTALFWVLQVIMVADIVDYGEYKLHVRCESIAYSVQTMVVKGGSAFAAFFIAVVLGMIGYVPNVEQSTQALLGMQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDKYRKVPPEPVHADIPVGAVSDVKA
1	MUSTER	1pw4A	0.132	0.852	1.402	threading_1	WQIFLGIFFGYAAYYLVRK-NFALAMPYLV------QGFSRGDLGFALSGISIAYGFSKFIMGSVSD----RSN--RVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVH---SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND------WHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFG-----------WDGGFMVMIGGSILAVILLIVVMIGE----KRRHEQLLQELVP------------------------
2	SPARKS	1pw4a	0.114	0.873	2.307	threading_2	PAAEIDPTYRRLRWQIFLGIFFGYAAYYLFALAMPYLGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP-----RVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWH------AALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWD----------GGFMVMIGGSILAVILLIVVMIGEK----RRHEQLLQELVP-------------------------
3	PROSPECT2	1pw4A	0.119	0.871	2.373	threading_3	PAAEIDPTYRR----LRWQIFLGIFFGYAAYYLVRKQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV-----FLPAGLILAAAVMLFMGFVP--WATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWH----AALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV------DFFGWDGGFMVM--------IGGSILAVILLIVVMIGEKRRHEQLLQE------------------------LVP
4	PPA-I	1pw4A	0.123	0.875	1.708	threading_4	PAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP-----RVFLPAGLILAAAVMLFMGFVPW--ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAA------LYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF------FGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP--------------------------------
5	HHPRED-l	3o7q_A	0.108	0.820	4.731	threading_5	-RSYIIPFALLCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMK----KLSYKA-GIITGLFLYALGAALFAEIMN------YTLFLVGLFIIAAGLGCLETAANPFVTVLGP-ESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHSLVLSVQTPYMIIVAIVLLVALLIMTKFPALQSDN---HSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGMAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF-----AGGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQD--------TKYGSSFI-VMTIIGGGIVTPVMGFVSDAGNIPTA---------------ELIPALCFAVIFIFARFRSQT--------------------------------------
6	HHPRED-g	3o7q_A	0.111	0.820	4.292	threading_6	-RSYIIPFALLCSLFFLWAVANNLNDILL-PQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK----LSY-KAGIITGLFLYALGAALFAEIMNY------TLFLVGLFIIAAGLGCLETAANPFVTVLG-PESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHSLVLSVQTPYMIIVAIVLLVALLIMTKFPALQSDN---HSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF---A--GGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLG-------QD-TKYGSSFI-VMTIIGGGIVTPVMGFVSDAGNIPTA---------------ELIPALCFAVIFIFARFRSQT--------------------------------------
7	SP3	1pw4a	0.116	0.873	2.497	threading_7	PAAEIDPTYRRLRWQIFLGIFFGYAAYYFALAMPYLQGFSRGDLGFALSGISIAYGFSKFIMGSVSD----RSN-PRVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWS-QKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN------DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWD---------------GGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP------------------------
8	SAM-T99	1pw4A	0.127	0.852	0.981	threading_8	RRLRWQIFLGIFFGYAAYYLVRKNFA--LAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSN------RVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWF----GMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND------WHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNMICMIVIGFLIYGPVMLIGLHALELAP-----------KKAAGTAAGFTGFGYLGGSVAASAIVGYTVDFFGWDGGF---------MVMIGGSILAVILLIVVMIG------EKRRHEQLLQEL--------------------------
9	MUSTER	1pv6A	0.129	0.854	1.384	threading_9	M-LKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL----GLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGIYLGFCFNAGAPAVEAFIEKVSRRSN-----FGRARMFGCVGWALGASIVGIMFTIN--------NQFVFWLGSGCALILAVLLFFAAPSSATVANAVGANHSAFS-LKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFA-----TSALEVVILKTLHMFEVPFLLVGCFKYITSQFE-------VRFSATIYLVCFCFKQLAMIFMSVLAGNMYESIG-----------FQGAYLVLGLVALGFTLISVFTLSGPGPLS--LLRRQVNEVA-------------------------
10	SPARKS	1pv6a	0.123	0.858	2.185	threading_10	LKNTNFWMF--GLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLR----KYLLWIITGMLVFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFN----AGAPAVEAFIEKVSRRSNFGRARMFG-CVGWALGASIVGIMFTI----NNQFVFWLGSGCALILAVL--LFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIAPLIINRIGGKNALLLAGTIMSVRIIGS-----SFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFE-------VRFSATIYLVCCFFKQLAMIFMSVLAGNMYESIGF-------QGAY---------LVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA----------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.869 to 1pw4A SCOP code=f.38.1.1	TM-score=0.869 to 1pw4A SCOP code=f.38.1.1	TM-score=0.881 to 1pw4A SCOP code=f.38.1.1	TM-score=0.859 to 1pw4A SCOP code=f.38.1.1	TM-score=0.876 to 1pw4A SCOP code=f.38.1.1