Template-based Modeling Results for MDAB_ECOLI

Submitted Primary Sequence

>Length 193
MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG
4210000000231230112002000200110044111102101122322031112102201000000000100001001200110022010001123222333223321221213122000000120213111333211211112000100110020010310200000001313301200320231023115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG
1	MUSTER	3rpeA	0.668	1.000	3.716	threading_1	MSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVDQGYDIESEIENYLWADTIIYQMPAWWMGEPWILKKYIDEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKTYMLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHKANQFLGMKPLPTFMCNDVIKQPDIEGDIARYRQHLAENVN
2	SPARKS	2amja	0.914	0.902	3.728	threading_2	SSNILIINGAKG------QLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQPG--WWGAPWTVKKYIDDVFTEGHGTLYASDGR-------KYGSGGLVQGKKYL-SLTWNAPEAFTEKDQ-FFHGVGVDGVYLPFHKANQFLG-EPLPTFIANDVIKP-DVPRYTEEYRKHLVEIFG
3	PROSPECT2	3rpeA	0.668	1.000	3.816	threading_3	MSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVDQGYDIESEIENYLWADTIIYQMPAWWMGEPWILKKYIDEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKTYMLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHKANQFLGMKPLPTFMCNDVIKQPDIEGDIARYRQHLAENVN
4	PPA-I	3rpeA	0.668	1.000	3.895	threading_4	MSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVDQGYDIESEIENYLWADTIIYQMPAWWMGEPWILKKYIDEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKTYMLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHKANQFLGMKPLPTFMCNDVIKQPDIEGDIARYRQHLAENVN
5	HHPRED-l	2amj_A	0.994	0.896	4.717	threading_5	SSNILIINGAK------GQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQ-PGWW-GAPWTVKKYIDDVFTEGHGTLYASDGR-------KYGSGGLVQGKKY-LSLTWNAP-EAFTEKDQFFHGVGVDGVYLPFHKANQFLG-EPLPTFIANDVIK-PDVPRYTEEYRKHLVEIF-
6	HHPRED-g	2amj_A	0.994	0.902	4.520	threading_6	SSNILIINGAK------GQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQ-PGWW-GAPWTVKKYIDDVFTEGHGTLYASDGR-------KYGSGGLVQGKKY-LSLTWNAP-EAFTEKDQFFHGVGVDGVYLPFHKANQFLG-EPLPTFIANDVIK-PDVPRYTEEYRKHLVEIFG
7	SP3	2amja	0.920	0.902	4.024	threading_7	SSNILIINGAKG------QLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQPG--WWGAPWTVKKYIDDVFTEGHGTLYASDGR-------KYGSGGLVQGKKYL-SLTWNAPEAFTEKDQ-FFHGVGVDGVYLPFHKANQFLG-EPLPTFIANDVIK-PDVPRYTEEYRKHLVEIFG
8	SAM-T99	2b3dA	0.995	1.000	4.982	threading_8	SSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG
9	MUSTER	2b3dA	0.995	1.000	3.540	threading_9	SSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG
10	SPARKS	3f2va	0.221	0.891	3.524	threading_10	-PKTLIILAHPNISQS--TVHKHWSDAVRQHTDFTVHELYAVYPQGKIDVAAEQKLIETHDSLVWQFPIYWFNCPPLLKQWLDEVLTYGWAYGSK---------------GKALKGRKIALAVSLGAPAADYRADG--AVGCSVAEVLRPFELTAKYCNADYRPPFTFHTSEAAQEVERSARDYLAWLDAL-Q

Predicted Tertiary Structure


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TM-score=0.759 to 1sg0A TM-score=0.967 to native SCOP code=c.23.5.3	TM-score=0.759 to 1sg0A TM-score=0.967 to native SCOP code=c.23.5.3	TM-score=0.747 to 1sg0A TM-score=0.927 to native SCOP code=c.23.5.3	TM-score=0.759 to 1sg0A TM-score=0.967 to native SCOP code=c.23.5.3	TM-score=0.759 to 1sg0A TM-score=0.967 to native SCOP code=c.23.5.3

Experimental Structure

Download 2b3dA

SCOP code=c.23.5.3