Template-based Modeling Results for MCRC_ECOLI

Submitted Primary Sequence

>Length 348
MEQPVIPVRNIYYMLTYAWGYLQEIKQANLEAIPGNNLLDILGYVLNKGVLQLSRRGLELDYNPNTEIIPGIKGRIEFAKTIRGFHLNHGKTVSTFDMLNEDTLANRIIKSTLAILIKHEKLNSTIRDEARSLYRKLPGISTLHLTPQHFSYLNGGKNTRYYKFVISVCKFIVNNSIPGQNKGHYRFYDFERNEKEMSLLYQKFLYEFCRRELTSANTTRSYLKWDASSISDQSLNLLPRMETDITIRSSEKILIVDAKYYKSIFSRRMGTEKFHSQNLYQLMNYLWSLKPENGENIGGLLIYPHVDTAVKHRYKINGFDIGLCTVNLGQEWPCIHQELLDIFDEYLK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEQPVIPVRNIYYMLTYAWGYLQEIKQANLEAIPGNNLLDILGYVLNKGVLQLSRRGLELDYNPNTEIIPGIKGRIEFAKTIRGFHLNHGKTVSTFDMLNEDTLANRIIKSTLAILIKHEKLNSTIRDEARSLYRKLPGISTLHLTPQHFSYLNGGKNTRYYKFVISVCKFIVNNSIPGQNKGHYRFYDFERNEKEMSLLYQKFLYEFCRRELTSANTTRSYLKWDASSISDQSLNLLPRMETDITIRSSEKILIVDAKYYKSIFSRRMGTEKFHSQNLYQLMNYLWSLKPENGENIGGLLIYPHVDTAVKHRYKINGFDIGLCTVNLGQEWPCIHQELLDIFDEYLK
CCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEQPVIPVRNIYYMLTYAWGYLQEIKQANLEAIPGNNLLDILGYVLNKGVLQLSRRGLELDYNPNTEIIPGIKGRIEFAKTIRGFHLNHGKTVSTFDMLNEDTLANRIIKSTLAILIKHEKLNSTIRDEARSLYRKLPGISTLHLTPQHFSYLNGGKNTRYYKFVISVCKFIVNNSIPGQNKGHYRFYDFERNEKEMSLLYQKFLYEFCRRELTSANTTRSYLKWDASSISDQSLNLLPRMETDITIRSSEKILIVDAKYYKSIFSRRMGTEKFHSQNLYQLMNYLWSLKPENGENIGGLLIYPHVDTAVKHRYKINGFDIGLCTVNLGQEWPCIHQELLDIFDEYLK
553220203000000000000023132231312223300100010002001200431132211212241200101010121032112231200010121232020020010001001323312220121021012202202223111310220201211310210010010002111223342222012022212101100120011003330222322111021312222332232013010000011222000000202422223222333021300100010012131322310100000032332243212121110000001022313101310230033215
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEQPVIPVRNIYYMLTYAWGYLQEIKQANLEAIPGNNLLDILGYVLNKGVLQLSRRGLELDYNPNTEIIPGIKGRIEFAKTIRGFHLNHGKTVSTFDMLNEDTLANRIIKSTLAILIKHEKLNSTIRDEARSLYRKLPGISTLHLTPQHFSYLNGGKNTRYYKFVISVCKFIVNNSIPGQNKGHYRFYDFERNEKEMSLLYQKFLYEFCRRELTSANTTRSYLKWDASSISDQSLNLLPRMETDITIRSSEKILIVDAKYYKSIFSRRMGTEKFHSQNLYQLMNYLWSLKPENGENIGGLLIYPHVDTAVKHRYKINGFDIGLCTVNLGQEWPCIHQELLDIFDEYLK
1	PROSPECT2	1m5ya	0.052	0.836	1.371	threading_1	VDNGVVLESDVDGLMQSVKLNAAQAR------QQLPDDATLRHQIMERLIMDQI-----------------------ILQMGQK--------------MGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYD----------GLNYNTYRN----QIRKEMIISEVRNNEVRRRITILPQVTELNLLPENPTSDQVNEAESQARAIVDQARNGADGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVSPIMTDEQARVKLEQIAADIKSGKTTDLGWALTRLNKGQMSAPVHSSFGWHLIELLDTRNVNRKFSEEAASWMQEQLS
2	HHPRED-l	1y88_A	0.095	0.362	1.141	threading_2	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYFQGMVARLLEEH----GFETKTNV--IVQGNCVEQE------IDVVAERDGERYMIECKFHNI---------PVYTGLKEAMYTYARFLDVEKHGFTQPWIFTN-TK--FSEEAKKYAGCVGIKLTGWSYPEKGIKEVLDELVRAGL-
3	PROSPECT2	1ki1b	0.070	0.859	1.299	threading_3	DMLTPTEVNDLQLVTEIFQKPLMESELLTEKEVAMVNWKELCNIKLLKALRVRKKMSGEKM-----PVKMIGDILSAQLPHMQPY-----------------IRFCSRQLNGAALIQQKTDEAPDFKEFVKRLE-----------MDPRCKGMPLSSFILKPMQRVTRYPLIIKNILENTPENHPDHSHLKHALEKAEELCSQVGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNCLGPRKFLHSGKLYKFLLLTQITKPKVFSPKSN---------------LQYMYKTPIFLNEVLVKLPTDPSGDFHISHIDRVYTLRAES-INERTAWVQKIKAASELYKR
4	HHPRED-l	2fok_A	0.147	0.819	1.024	threading_4	SGFTSLPEGILLDTLANAMP--KDK--GEIR-NNWEGSSDKYARMIGGWL---DKLGLVKQGKKEIPT-----NKITGEKVLRRAKGTKTRVPKVYWEMLADKEYVRTRRALLEILIKAGSLKIQIQDNLKK-----LGFDEVIETINDIKGFVIP-----VKSELEEKKSELRHKLKYVPHEYIELIEIARNST-QDRILEMKVMEFFMKVYGYRGKH----------LG-------GSRKPDGAIYTVGYGVIVDTKAYS-------GGYNLPIGQADEMQRYVEENQTRNKHPNEWWKVYPS---SVTEFKFVSGH--------FKG---NYKAQLTRLNHITK-
5	PROSPECT2	1ntyA	0.079	0.833	1.195	threading_5	ARRKEFIMAELIECMDTYLWEMTSGV-EEIPPGIVNKELIIFGNM--QEIYEFHNNIFLKELEKYEQLPE------DVGHCFVTWADK--------------------FQMYVTYCKNKPDSTQLILEHAGSYFDEIQQRHGLANSISSY----LIKPVQRITKYQLLLKELLTCCEEGKGE--------IKDGLEVMLSVPKRANDAMHLGFDENIESQGELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSEL--------GVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIE--------NKQDWIKHIREVIQER-T
6	PROSPECT2	1uuqA	0.085	0.945	1.193	threading_6	APNEVGDRDRLAKELDNLKASEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDM---TVVLYFNNFWQWSGGMTQYMAWIE-----------GEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVPRPGNSQTTAEEKQIYIDWVHAAAAYI--KTLDAHHLVSSGSEGEMGSVNDMQVFIDAH---ATPDIDYLTYHMWIRNWSWFDKTKPAETWPSADVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIRANYWWQEGDDFMGDPPQEEQGMYGVFDTDTSTIAIMKEFNARFQP
7	PROSPECT2	1foea	0.075	0.876	1.182	threading_7	QLSDADKLRKVICLLETERTYVKDRYLKPLQKETFLTQDELFQVEFLKTLEDGVRLVPDLE------------------------------------KLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASVPKVLVKAKTDTAFKAFLDAQNPRQQHSRVLKYPLLLRELFALTDAESEEHYHLDVAIKTNKVASHKIHEEFGAVFDQLIEVADLSGDLLLHTSVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYE-------EWDPFRFRHIPTEALQVRALPSADAEANAVCRPERVFHLCCSSPESRKDFLKSVHSILRDKHQ
8	MUSTER	2g47B	0.081	0.963	0.687	threading_8	VENKNVPLPEF---LKQLYKIVPIKDIRDLQKYYKSNPGHYLGHLIGHLLSELKSKGWVGGQKEGARGFMFFIINVDLTEEGLLHVEDIILHMFQYQKLRAEGPQEWVFQECKDLNAVAFKDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRP--DLIEMVLDK-NVRVAIVSKSFEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFKQKFFLFEFFSPFAYVDPLHCNMAYLYLELLKDSLNE-------YAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFID
9	SPARKS	1yrga	0.094	0.882	0.639	threading_9	IEGKSLKLDAITEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIA----------------SKKDLE-IAEFSDIFTGRVKDE---------------IPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS-HRLLHTVKGIRPEGIEHLLLEGLAYCQELK---VLDLQDNTFLAIALKSWPNLREGLNDCLLSARGAAAVVDAFSKLENIGLQT-----LRLQYNEIELDAVRIDEKMPDLLFLELNGEEDDVVDEIREVFSTRGR
10	PROSPECT2	2f8lA	0.092	0.747	1.175	threading_10	ANE---ATQELFQVLDNTAIILQN--------ELEISYLEAVYETGENLFQ---------------------------------------------KEVLQKEEKQLKLQASYESIELENFSNEEIRKGLQLALLKGKH-----------------GIQVNHDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQDLLISLALVGADLQRQKTLLH--------QDGLANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGDAFGTSDFAKVDKFIKKNGHKSQARKSILILEKADVDVKPP------KEVLLANLSSLTDPSVTAPILAEI-ENWFK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.485 to 1m5yD SCOP code=a.223.1.2	TM-score=0.602 to 1y88A SCOP code=a.60.4.3	TM-score=0.665 to 1ki1D SCOP code=a.87.1.1	TM-score=0.493 to 1fokA SCOP code=a.4.5.12	TM-score=0.716 to 1ntyA SCOP code=a.87.1.1