Template-based Modeling Results for LYXK_ECOLI

Submitted Primary Sequence

>Length 498
MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCMAVIRALLTHSGVSGEQIVGIGISAQGKGLFLLDKNDKPLGNAILSSDRRAMEIVRRWQEDGIPEKLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTHDYLRWCLTGVKGCEESNISESNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEICGEITAQTAALTGLKAGTPVVGGLFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGLRDGEAHPYVYGRYVNDGEFIVHEASPTSSGNLEWFTAQWGEISFDEINQAVASLPKAGGDLFFLPFLYGSNAGLEMTSGFYGMQAIHTRAHLLQAIYEGVVFSHMTHLNRMRERFTDVHTLRVTGGPAHSDVWMQMLADVSGLRIELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPVRTLLPDMTAHQLYQKKYQRYQHLIAALQGFHARIKEHTL
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCMAVIRALLTHSGVSGEQIVGIGISAQGKGLFLLDKNDKPLGNAILSSDRRAMEIVRRWQEDGIPEKLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTHDYLRWCLTGVKGCEESNISESNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEICGEITAQTAALTGLKAGTPVVGGLFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGLRDGEAHPYVYGRYVNDGEFIVHEASPTSSGNLEWFTAQWGEISFDEINQAVASLPKAGGDLFFLPFLYGSNAGLEMTSGFYGMQAIHTRAHLLQAIYEGVVFSHMTHLNRMRERFTDVHTLRVTGGPAHSDVWMQMLADVSGLRIELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPVRTLLPDMTAHQLYQKKYQRYQHLIAALQGFHARIKEHTL
CCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHEECHHHHHHHHHHCCCEEEHHHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCEEEECHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCMAVIRALLTHSGVSGEQIVGIGISAQGKGLFLLDKNDKPLGNAILSSDRRAMEIVRRWQEDGIPEKLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTHDYLRWCLTGVKGCEESNISESNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEICGEITAQTAALTGLKAGTPVVGGLFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGLRDGEAHPYVYGRYVNDGEFIVHEASPTSSGNLEWFTAQWGEISFDEINQAVASLPKAGGDLFFLPFLYGSNAGLEMTSGFYGMQAIHTRAHLLQAIYEGVVFSHMTHLNRMRERFTDVHTLRVTGGPAHSDVWMQMLADVSGLRIELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPVRTLLPDMTAHQLYQKKYQRYQHLIAALQGFHARIKEHTL
452000000100010000001330210011213022211231102200220030002002200331212030000000012030000013323100200000122023003302431223201310311111000000020023122310110110000100000000121001001002000010120300210021020220231003012113100201220033010322000000000100000010011312000000010000012322332421000000011312000100000000002000311130213300210221241121000000010220111020000002020122100100010000001100200343223021010011103020000000100302020031320000000000000001132022003202312210212221121023103101300300220123033324
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCMAVIRALLTHSGVSGEQIVGIGISAQGKGLFLLDKNDKPLGNAILSSDRRAMEIVRRWQEDGIPEKLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTHDYLRWCLTGVKGCEESNISESNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEICGEITAQTAALTGLKAGTPVVGGLFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGLRDGEAHPYVYGRYVNDGEFIVHEASPTSSGNLEWFTAQWGEISFDEINQAVASLPKAGGDLFFLPFLYGSNAGLEMTSGFYGMQAIHTRAHLLQAIYEGVVFSHMTHLNRMRERFTDVHTLRVTGGPAHSDVWMQMLADVSGLRIELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPVRTLLPDMTAHQLYQKKYQRYQHLIAALQGFHARIKEHTL
1	MUSTER	2zf5O	0.223	0.972	3.834	threading_1	MEKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQRETTLVWDKDGKPLYNAIVWQCRRTAEMVEEIKRE-YGTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKAEMFGTVDTFLIYRLTGEHVTDYSNASRTMLFNIKKLDWDDELLELFDIPE--SVLPEVRESSEVYGYTKKE-----LLGAEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGLVNTDKMVLYS-DNLLTTIAWGLNGRVSYALEGSIFVTGAAVQWLRDGIKIIKHASETEELATKLESNEGVYFVPAFVGLGAPYWARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEMEK-LVQIKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREIAELW-KAERIFEPKMD-EKTRERLYKGWKEAVKRAMGWAKVVDSA--
2	SPARKS	3kzba	0.210	0.956	6.585	threading_2	LAFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQQ-NFLPLDQDHEPLHRAVLYSDKRPLKEAEEINARHGADNLWSALENPTAASI-LPKLVFWRASFPQAFGRLRHLGA-KDYVVLRLTGRHATDRTNASTTGLYRPKDDAWHVELLADYGFSLD---LPRLLEPGEQVGGVSALAARQTGFVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGRLTQTDPVGDPVGTIFRLAGIIAG--KTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHAAVTVPDGLLFVPYLHAERCPVEPRGALLGVTGATTRAQILLAVLEGAALSLRWCAELL---GEKVGLLKVVGGGARSEAWLRIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADLESNILHPQPCDEGRRRRKFERFKQCVETLGR----------
3	PROSPECT2	2itmA	0.232	0.954	5.517	threading_3	M---YIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQ--DVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVP--QSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSR--DQMPALYEGSEITGALLPEVAKAWGMA-TVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSP-----QAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDGPALGAARLAQIAANPEKSLIELLPQL-PLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA-------
4	PPA-I	2zf5O	0.223	0.972	5.069	threading_4	MEKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQRETTLVWDKDGKPLYNAIVWQCRRTAEMVEEIKR-EYGTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKAEKFGTVDTFLIYRLTGEHVTDYSNASRTMLFNIKKLDWDDELLELFDIPE--SVLPEVRESSEVYGYTKKE-----LLGAEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSVNTDKMVLYS-DNLLTTIAWGLNGRVSYALEGSIFVTGAAVQWLRDGIKIIKHASETEELATKLESNEGVYFVPAFVGLGAPYWARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEMEK-LVQIKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREIAEL-WKAERIFEPKMD-EKTRERLYKGWKEAVKRAMGWAKVVDSA--
5	HHPRED-l	3ifr_A	0.256	0.958	3.909	threading_5	--RQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDWRPGGICVTG-LPAVVLLDDRGAVLRPSIQQSDGRCGDEVAELRAEVDSEAFLARTGNGVTQQLVTAKLRWIERHEPAVFGAIATVCGSYDYIN-LLTGERVVDRNWALEGGFIDLASGTVEADLVALAHIPPS--AVPPAHPTHRVLGAVTAEAAALTGLPTGLPVYGGAADHIASALAAGITRPGDVLLKFGGAGDIIVASATAKSDP-R-LYLDYHLVPGLYAPNGC-AATGSALNWLAKLLAPEAHAQLDALAAEVPAGADGLVCLPYFLGEK---FASGTFTGLSLSHTRGHLWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSRVW-GI-ADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWD-DVTALVRTGEKITPDPAKAEVYDRLYRDFSALYATLHPFFHR------
6	HHPRED-g	3ll3_A	0.211	0.952	3.289	threading_6	SLKYIIG-DVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQK--IDGK-IAAISWSSQ-HSLIGLGSDDELLTNSITWADNCAKSIVQDAKNRGFAQQIYRKTG---HP-APIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLVTDTT-AAGTGILNLKTLTWDQELLDILKIKK--EQLPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPS--ASYFCYPAKTHYLLGGPVNNGGIVFNWARQTLFDTPQDFLD-VAQTAPAGSRNLIFLPYLGGERAPINARGSFVGLTR-HQKPE-ARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVT-KEQQSGTLAA-FLARQALGLNQDL-SEIGQFAQADKVYFPNPKEAATYQKLFPLYCEIRNALAASYGKFS----
7	SP3	3kzba	0.212	0.956	6.684	threading_7	LAFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQQNFLP-LDQDHEPLHRAVLYSDKRPLKEAEEINARHGADNLWSALENPTAASI-LPKLVFWRASFPQAFGRLRHLGA-KDYVVLRLTGRHATDRTNASTTGLYRPKDDAWHVELLADYGFSLD---LPRLLEPGEQVGGVSALAARQTGFVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGRLTQTDPVGDPVGTIFRLAGIIAG--KTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHAAVTVPDGLLFVPYLHAERCPVEPRGALLGVTGATTRAQILLAVLEGAALSLRWCAELL---GEKVGLLKVVGGGARSEAWLRIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADLESNILHPQPCDEGRRRRKFERFKQCVETLGR----------
8	SAM-T99	2nlxA	0.230	0.950	4.043	threading_8	M---YIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSL--QDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVP--QSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSR--DQMPALYEGSEITGALLPEVAKAWGMAT-VPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLS-------AKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDGPALGAARLAQIAANPEKSLIELLPQ-LPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA-------
9	MUSTER	3h3nX	0.222	0.976	3.767	threading_9	EKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQRETTVVWDKTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADLFGTIDSWLVWKLTDVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPS--SMLPEVKSNSEVYGHTRS----YRFYGSEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGVMNTGEEPQLSDNDLLTTIGYGINGKVYYALEGSIFVAGSAIQWLRDGLRMIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKKDGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKSMA-EEGQMFTPEMP-AEERDNLYEGWKQAVAATQTFKFKAK----
10	SPARKS	3ll3a	0.195	0.950	6.544	threading_10	-SLKYIIGDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GKIAAISWSSQH--SLIGGSDDELLTNSITWADNCAKSIVQDAKNRGFAQQIYRKTGPHPAP---IYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLVTD-TTAAGTGILNLKTLTWDQELLDILKIK--KEQLPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGTIVDQPKIDPSASYFCYPAD----KTHYLLGGPVNNGGIVFNWARQTLFDADPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWARGSFVGLTRHQK--PEARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTKE--QQSGTLAAFLARQALGLNQDLSEIGQFA-QADKVYFPNPKEAATYQKLFPLYCEIRNALAASYGKFS----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.616 to 1huxA SCOP code=c.55.1.5	TM-score=0.618 to 1huxA SCOP code=c.55.1.5	TM-score=0.554 to 1huxA SCOP code=c.55.1.5	TM-score=0.538 to 2aa4A SCOP code=c.55.1.10	TM-score=0.619 to 1huxA SCOP code=c.55.1.5