Template-based Modeling Results for LSRK_ECOLI

Submitted Primary Sequence

>Length 530
MARLFTLSESKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSMEFDLNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNEGAPIWACANVDARAAREVSELKELHNNTFENEVYRATGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYMLSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVPPGSWGVMPIFSDRMRFKTWYHAAPSFINLSIDPDKCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDKWQAVYQDQLGLVDHGLTTSLWKAPGL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MARLFTLSESKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSMEFDLNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNEGAPIWACANVDARAAREVSELKELHNNTFENEVYRATGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYMLSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVPPGSWGVMPIFSDRMRFKTWYHAAPSFINLSIDPDKCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDKWQAVYQDQLGLVDHGLTTSLWKAPGL
CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCEEEEECCCCCEEEEEHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCEEEEHHHHHCCCCEECCCCCCCHHHHHHCCCCHHHCCCCCCCCCEEEEECHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MARLFTLSESKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSMEFDLNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNEGAPIWACANVDARAAREVSELKELHNNTFENEVYRATGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYMLSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVPPGSWGVMPIFSDRMRFKTWYHAAPSFINLSIDPDKCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDKWQAVYQDQLGLVDHGLTTSLWKAPGL
55322323322100000011000010000124121001010314121113121012100220020002002200431212230000000012220000113321000000001121231022023223322221003101111110000101001313230031012001000000010001000000200100000022230321002102031310030331111001012200330203220000000001000000100133120100000000000002232223420000000002110001000000000020012000211221033221311210120023023102000000012010211220100000001222302121001001100000011002100311413021000011003030000000100302020022320100000000000001131022003300322221212231131022003101100320120013000101140224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MARLFTLSESKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSMEFDLNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNEGAPIWACANVDARAAREVSELKELHNNTFENEVYRATGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYMLSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVPPGSWGVMPIFSDRMRFKTWYHAAPSFINLSIDPDKCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDKWQAVYQDQLGLVDHGLTTSLWKAPGL
1	MUSTER	2zf5O	0.250	0.913	3.616	threading_1	ME---------KFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQ--HYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQRETTLVWDKDGKPLYAIVWQCRR----TAEMVEEIKREYGTMIKEKTGLVPAYFSASKLKWLLDNVPGLREKAEMFGTVDTFLIYRLTGEHVTDYSNASRTMLFNIKKLDWDDELLELFDIPESVLPEVRESSEVYGYTKKE-----LLGAEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTDKMVLYSDNLLTTIAWGLNGSYALEGSIFVTGAAVQWLRDGIKI----------IKHASETEELATKLESEGVYFVPAFVGLGAPYWDQFARGIIIGIT---RGTGREHLARATLEAIAYLTRDVVDEMEKL--VQIKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREIAELW-KAERIFEPKMD-EKTRERLYKGWKEAVKRAMGWAKVV--SA-------
2	SPARKS	3ll3a	0.192	0.902	6.572	threading_2	----------SLKYIIGDVGTTATKGVLYDINGKAVASVSKGYPL--IQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GKIAAISWSSQH--SLIGGSDDELLTSITWADNCAKSIVQDAKN---RGFAQQIYRKTGPHP--APIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLVTD-TTAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPSASYFCYPAD-KTHYLLGGPVNNGGIVFNWARQTLFDAD---------ETPQDFLDVAQTAPAGNLIFLPYLGGERAPIWDANARGSFVGLT---RHQK--PEARAVIEGIIFNLYDAASNLIKNTK-KPVAINATGGFLKSDFVRQLCANIFNVPIVTKE--QQSGTLAAFLARQALGLNQDLSEIGQ-FAQADKVYFPNPKEAATYQKLFPLYCEIRNALAASY-GKFS---------
3	PROSPECT2	2itmA	0.248	0.889	5.217	threading_3	M------------YIGIDLGTSGVKVILLNEQGEVVAAQTEKLTV--SRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQ--DVKALGIAGQMHGATLLDAQQRVLRAILWNDGRCAQECTLLEARVPQ-----SRVITGNLMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMA-TVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLT-----------GLSNVPALIAAAQQADESAEPFLPYL--------SPQAKGVFFGLTHQ---HGPNELARAVLEGVGYALADGMDVVHA-CGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDGPALGAARLAQIAANPEKSLIELLPQ-LPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA-------------
4	PPA-I	3ezwG	0.239	0.915	4.998	threading_4	--------TEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIY--PKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKTGKPIYNAIWQCRRTAEICEHLKRDG---LEDYIRSNTGLVIPYFSGTKVKWILDHVEGSRERARRFGTVDTWLIWKMTQVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDG----KGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTNYALEGAVFMAGASIQWLRDEMKL----------INDAYDSEYFATKVQNNGVYVVPAFTGLGAPYWDPYARGAIFGLT---RGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKA-VIEREFRPGIE-TTERNYRYAGWKKAVKRAMAWEE-------------
5	HHPRED-l	3ll3_A	0.187	0.900	3.900	threading_5	-------S--LKYIIG-DVGTTATKGVLYDINGKAVASVSKGYPL--IQTKVGQAEEDPKLIFDAVQEIIFDLTQK--IDGK-IAAISWSSQ-HSLIGLGSDDELLTNSTWADNCAKSIVQDAKNRGF--AQQIYRKTG---HP-APIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLVTDTT-AAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPS--ASYFCYPAKTHYLLGGPVNNGGIVFNWARQTLFDA--------DETPQDFLD-VAQTAPAGSRNFLPYLGGERAPIWDANARGSFVGLTR----HQKPE-ARAVIEGIIFNLYDAASNLIK-NTKKPVAINATGGFLKSDFVRQLCANIFNVPIVT-KEQQSGTLAA-FLARQALGLNQDL-SEIGQFAQADKVYFPNPKEAATYQKLFPLYCEIRNALAASY-GKFS---------
6	HHPRED-g	3ll3_A	0.195	0.900	3.305	threading_6	---------SLKYIIG-DVGTTATKGVLYDINGKAVASVSKGYPL--IQTKVGQAEEDPKLIFDAVQEIIFDLTQK--IDGK-IAAISWSSQ-HSLIGLGSDDELLTSITWADNCAKSIVQDAKNRGF---AQQIYRKTG--HP-APIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLVTDTT-AAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPS--ASYFCYPAKTHYLLGGPVNNGGIVFNWARQTLFDA--------DETPQDFLD-VAQTAPAGSRNFLPYLGGERAPIWDANARGSFVGLTR----HQKPE-ARAVIEGIIFNLYDAASNLIK-NTKKPVAINATGGFLKSDFVRQLCANIFNVPIVT-KEQQSGTLAA-FLARQALGLNQDL-SEIGQFAQADKVYFPNPKEAATYQKLFPLYCEIRNALAASYGKFS----------
7	SP3	3ll3a	0.195	0.900	6.709	threading_7	-----SL-----KYIIGDVGTTATKGVLYDINGKAVASVSKGYPLIQ--TKVGQAEEDPKLIFDAVQEIIFDLTQKID---GKIAAISWSSQH--SLIGGSDDELLTSITWADNCAKSIVQDAKN---RGFAQQIYRKTGPHP--APIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLVTD-TTAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPSASYFCYPAD-KTHYLLGGPVNNGGIVFNWARQTLFDAD---------ETPQDFLDVAQTAPAGNLIFLPYLGGERAPIWDANARGSFVGLT---RHQK--PEARAVIEGIIFNLYDAASNLIKNTK-KPVAINATGGFLKSDFVRQLCANIFNVPIVTKE--QQSGTLAAFLARQALGLNQDLSEIGQFA-QADKVYFPNPKEAATYQKLFPLYCEIRNAL---------AASYGK--F
8	SAM-T99	2zf5O	0.255	0.904	3.785	threading_8	---------MEKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFP--QHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQRETTLVWDKDGKPLYNIVWQCRRTAEMVEEIKREYG----TMIKEKTGLVPAYFSASKLKWLLDNVPGLREKAEKFGTVDTFLIYRLTGEHVTDYSNASRTMLFNIKKLDWDDELLELFDIPESVLPEVRESSEVYGYTKKEL-----LGAEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTDKMVLYSDNLLTTIAWGLNGRYALEGSIFVTGAAVQWLRDGIKIIK----------HASETEELATKLES-NEGVYPAFVGLGAPYWDQFARGIIIGITRGT---GREHLARATLEAIAYLTRDVVDEMEK--LVQIKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTRE-IAELWKAERIFEPKMDEKTR-ERLYKGWKEAVKRAMGWAK-------------
9	MUSTER	3ezwG	0.239	0.915	3.599	threading_9	--------TEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQ--IYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKTGKPIYNIVWQCRRTAEICEHLKRDG---LEDYIRSNTGLVIPYFSGTKVKWILDHVEGSRERARLFGTVDTWLIWKMTQVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDG----KGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTNYALEGAVFMAGASIQWLRDEMKL----------INDAYDSEYFATKVQNNGVYVVPAFTGLGAPYWDPYARGAIFGLT---RGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKA-VIEREFRPGIE-TTERNYRYAGWKKAVKRAMAWEE-------------
10	SPARKS	3kzba	0.188	0.915	6.454	threading_10	-----SLA---FYIATFDIGTTEVKAALADRDGGLHFQRSIALET--YGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQQ-NFLPLDQDHEPLHAVLYSDKRPLKEAEEINARHG---ADNLWSALENPTAASILPKLVFWRASFPQAFGRLRHLGA-KDYVVLRLTGRHATDRTNASTTGLYRPKDDAWHVELLADYGFSLDL-PRLLEPGEQVGGVSALAARQTGFVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPVGDPVGTIFRAGIIAGKTLQVAPVLNAGNILQWALTLVGHRPG-----EDCAEYFHAAAEVQGVTPDGLLFVPYLHAERCPVELPAPRGALLGVT---GATTRAQILLAVLEGAALSLRWCAELL----GEKVGLLKVVGGGARSEAWLRIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADRESNILHPQPCDEGRRRRKFERFKQCVETLGR----------------

Predicted Tertiary Structure


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TM-score=0.618 to 1huxA SCOP code=c.55.1.5	TM-score=0.621 to 1huxA SCOP code=c.55.1.5	TM-score=0.559 to 1huxA SCOP code=c.55.1.5	TM-score=0.542 to 2aa4A SCOP code=c.55.1.10	TM-score=0.592 to 1huxA SCOP code=c.55.1.5