Template-based Modeling Results for LPXK_ECOLI

Submitted Primary Sequence

>Length 328
MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRAPVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTTTAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVEIVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNLRTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALVSAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTLLASGN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRAPVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTTTAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVEIVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNLRTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALVSAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTLLASGN
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHCCEEEEEEECCCCCCCCCEEECCCCCCCHHHHCCCCEEEEECCCCCCCHHHHHHCCCCEEECCCCCCCCHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEECHHHHEECHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRAPVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTTTAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVEIVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNLRTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALVSAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTLLASGN
5122111231000000000000000000001101313133223030000000000031201000011002002422120000021132314211001233120220111001012313000000211120020002332301000011112213012101000010223111111000010222122033010000111124213000201222001022223131231220000000020230020033011201200002222201321011012202100002210120321134200001010202242122002102211344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRAPVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTTTAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVEIVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNLRTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALVSAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTLLASGN
1	PROSPECT2	1f0ka	0.118	0.826	1.321	threading_1	----------------------------------------------KRLMV--MAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMPKHGIEIDFIRISGLRGKGIKALIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLLAKIATKVMQAFPGAFPNAEVVGNPVALPLPQQRLAGRRVLVVGGSQGARILNQTMPQVA---------AKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMRSGALTVSEIAAAGLPALFDRQQYWNALPLEKAGAAKIIEQPQLSVDATERVANEVSRVARAL
2	HHPRED-l	2j37_W	0.145	0.863	1.682	threading_2	LRENVASGLNKRKMI---QHAVFKELVKLVDP-GVKAWTPTKG--NVIMFVG---LQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAF---------------DQLKQNATKARIPFYGSYTPVEGVEKFK--NENFEIIIVDTSGRHKAIQPDNIVYVMDASIG--QA----CEAQAKAFKDKVDVASVIVTKLDGHAKALSAVAATKSPIIIGTGEHIDDFEPFFISKLLGMGDIEGLIDKVNELKLD--DNEALLKHGQFTLRDMYEQFQMGQNEQESMARLKKLMTIMDS----------MNDQETDGAPGRIQRVARG-
3	SP3	3p32a	0.177	0.878	1.047	threading_3	LATAVRGGD--RAALPRAITLVESTRPDHREQAQQL-LLRLLPDSGNAHRVG-ITVPGVGKSTAIEALGMHLIERGHRVAVLAV----------------DMARLAVHPNAYIRPSPGTLGGVTRATRETVVLLEA--AGFDVILIEVGQSEVAVANDTFVLLTLAR--TGDQ--LQG--IKKGV--LELADIVVVNKADGEHHKEARLAARELSAAIRLIYPREALWRPPVLAVEGRG-LAELWDTVERH------RQVLTGAGEFDARRRDQQVDW---TWQLVRDAVLDRVWSNPTVRVRSLERRVRAGEPALAAQQILEIANLT
4	SAM-T99	3dm5A3	0.237	0.360	1.103	threading_4	--------------------------------------IEIKEKPTILLMVG---IQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAY---------------HQLRQLLDRYHIEVFGNPQEKDAIKLAKEGV-------------DYFKSKGVDIIIVDTAGRHKE--------------------------------------------------------------------DKALIEEMKQISNVI-------------------------------------------------------------------------
5	PROSPECT2	1w78A	0.157	0.930	1.297	threading_5	TPQ----AASPLASWLSYLERVSLVAARL----------GVLKPAPFVFTV----AGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPESAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILLGGRLDATNIVDADVAVVREAGIFRSEKPAEPEMPSTIADVAQEKGALLQRRGVETDHDWAFSDAHGTLENLPLPLVPALPKNGRVLAVIGMLHDKDIAGTLAWLVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADAKAEDTVL---VCGSFHTVAHVMEVIDA--RRS
6	HHPRED-l	2ffh_A	0.144	0.805	1.539	threading_6	FVERVLESLTPAEVI---LATVYEALKE---ALGGEARLPVLKDRNLWFLVG---LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAA----------------REQLLLGEKVGVPVLEVMSPESIRRRVEARLEARDLILVDTAGRLQVLGPDEVLLVLDAMTG--QE----ALSVARAFDEKVGVTGLVLTKLDGDARGLSARHVTGKPIFAGVSEKPEGLEP---------FYPERLAGRILGMGDVA----------ELSLEDFLKQMQLGP-F----SEILGLPGVP--------QGLKVDEKAIKRLEAIVKRIAKG-
7	SP3	3nxsa	0.162	0.884	1.039	threading_7	LAQSIRDGD--RSALARAITLVESTRADHREQAQQL-LLDLMPEAGSAMHVG-ITVPGVGKSTTIEALGMHLIEAGHRVAVLA---------------VDRMARLAVHPDAYISPTSGTLGGVAKATRETIVLLEA--AGYDVILVEVGQSEVTVAGDTFVFLTLAR--TGDQLQGIKKGV------LELADVIVVNKADGEHAVEAKAAARELSGAIRLIYPRESLWRPPVLAVEGTG-LPELWETVLRH------REVLEEAGEFEARRRTQQVEWTWSMVRDVLDRVMNHPEVRRIRDDVEQRVRLGELTPALAAQEILDAAQ--
8	SAM-T99	3dm5A	0.190	0.704	1.052	threading_8	--------------------------------------IEIKEKPTILLMVG---IQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAY---------------HQLRQLLDRYHIEVFGNPQEKDAIKLAKEGV-------------DYFKSKGVDIIIVDT-----------AGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQAYNQALALDGSAKGGGALSAVAATGAPIKFIGTGEKI-----DDIEPFDPPRFVSRLLGLG------------DIQGLLEKFKEEIKEEDIERFLRGKFTLKDMYAQLEAMRKM
9	PROSPECT2	1s8eA	0.096	0.823	1.265	threading_9	MGYEQFHKPQREEEFAEAFKNALEIAVQ-------------ENVDF-ILIAGDLFHSSRPSPGTLKKAIAIPKEHSIPVFAIEGNLVRTQRG--------------PSVLNLLEDFGLVYVIGMRKE---------KVENEYLTSERLGNGEYLVKKDLEIHGMKYMSSAWFEA-----NKEILKRLFRPTDNAILMLHQGVREVSEARGEDYFEIGLGDLPEGETSYSGSPVVYPGSLERWDFGD------YEVRYEWDGIK--------FKERYGVNKGFYIVEDFKPRFVEIKVRPF--IDVKIKGSEEEIRKAIKRLIPLIPKN
10	HHPRED-l	2v3c_C	0.185	0.808	1.507	threading_10	MSKEIALGLSKKEH---IIKIVYEELVK---LL-GEELELNPKKQNVILLVGI---QGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAAY---------------EQLKQLAEKIHVPIYGDESPVDIVKEGMEKFKKADVLIIDTAGRHKETNPDEIILVIDGTIG--QQ----AGIQAKAFKAVGEIGSIIVTKLDGSAKGLSAVAETKAPIFIGIGEGIDDLE---------PFDPKKFISRLLGMGDLLEKAEDMVDEKT--EESIDAIM-RGK---FTLNELMTLE---------------LTEAKIKKYKVII-SSMTG-

Predicted Tertiary Structure


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TM-score=0.618 to 1f0kA SCOP code=c.87.1.2	TM-score=0.619 to 1qzwA SCOP code=a.24.13.1	TM-score=0.759 to 2qm8A SCOP code=c.37.1.10	TM-score=0.570 to 1vmaA SCOP code=a.24.13.1	TM-score=0.654 to 1o5zA SCOP code=c.59.1.2