Template-based Modeling Results for LPXH_ECOLI

Submitted Primary Sequence

>Length 240
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
CEEEEEEHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCEEECCCEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHEEEECCCCCEEEEEECCCCCCCEEEEEECCEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
210000000101132120020002001111330200000000010001133112102300200210141201000010111110022002201010022210020211200000012112311101000020111001001210121002200210311133233232121121123001100342502000000001010010102432000000010122000010123201002034
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
1	MUSTER	1s8eA1	0.160	0.938	1.312	threading_1	MKFAHLADIHLGYEKPQREEEFAEAFKNALENVDFILIAGDLFH---SSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNLVRTVLNLLEDFGLVYVIGEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKRLFPTDNAILMLHQGVREVSEARGEDY---FEIGLGDLPE-----GYLYYALGHIHKR--YETSYSG--SPVVYPGSLERWVGFYIVEDFKPRFVEIKV
2	SPARKS	2hy1a	0.181	0.921	1.641	threading_2	YVLLHISDTHLIDA-DDRLGELLEQLNQSGLRPDAIVFTGDLA-----DKGEPAAYRKLRGLVEPFAAQGAELVWVMGNHDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHH-------GEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATF----VGIPVSVASA-TCGCNLVHVYPDTVVHSVIP-
3	PROSPECT2	2yvtA	0.122	0.887	2.312	threading_3	RKVLAIKNFKER---FDLLPKLKGVIAEK--QPDILVVVGNILKNEARREPNRKVIHENEHYFREIGELGVKTFVVPGKNDAPLKIFLRAAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEE----------------DFVLKYPRWYVEYILKFVNELKPRRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHELV-----GNTIVVNPGEFEEGRYALDLTQHKIKLEQFS-
4	PPA-I	1s8eA1	0.146	0.942	1.422	threading_4	MKFAHLADIHLGYEKPQREEEFAEAFKNALENVDFILIAGDLFH---SSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNLVRTSVLNLLEDFGLVYVIEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKRLFRPTDNAILMLHQGVREVSEARGEDYFEIGLGD-------LPEGYLYYALGHIHKR----YETSYSGSPVVYPGSLERWVGFYIVEDFKPRFVEIKV
5	HHPRED-l	2xmo_A	0.148	0.958	2.710	threading_5	LSMVVTTDVHYFAPSGYSDEITDAFLADVSKKTDVLIISGDLTNNGEK-----TSHEELAKKLTQVEKNGTQVFVVPGNHDINNPTDFSKIYSDFGYELSYLAASSKVW--LLMLDTAIYKTNMQPTTEGGLTAGTLDWIKESSALAKKAKLIPVLHHNLTDHNDV--KGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKTDGKEITDIVTNALSHKYGNITYSAKNFTYQSQK-
6	HHPRED-g	2kkn_A	0.213	0.646	2.267	threading_6	KRFLLISDSHVPVRMASLPDEILNSL----KEYDGVIGLGDYVD------------LDTVILLEKF---SKEFYGVHGNMDYPD---VK-----EHLPFSKVLLVEGVTIGMCHGWG----A----------------------P-------------WD--------------LKDRLLKVF-NEKPQVILFGHTHEPEDTVK----AGVRFLNPGSLAEGSYVLELDGGEVRFELKTL
7	SP3	2hy1a	0.176	0.921	1.704	threading_7	YVLLHISDTHLIDA-DDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-----PAAYRKLRGLVEPFAAQGAELVWVMGNHDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHH-------GEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATF----VGIPVSVASATCGC-NLVHVYPDTVVHSVIP-
8	SAM-T99	3auzA	0.197	0.742	2.355	threading_8	MMFVHIADNHLGYRQKDIYDSFKLCIKKIEIKPDVVLHSGDLFN----DLRPPVKLRIAMQAFKKLHENNIKVYIVAGNHEMPRRPLALLKDYVKILDGKDVINVNGEEIFIC---------------------------------------GTYYHKKSKREEMLDKLKNFESEAKNYKKKILMLKFSYYALGHIHKRILERF----------NDGILAYSGSTEIIYRN---------
9	MUSTER	1s3nA	0.147	0.650	1.118	threading_9	MKIGIMSDTH---DHLPNIRKAIEIFNDE--NVETVIHCGDFVS------------LFVIKEFENL---NANIIATYGNNRCKLKEWLKDINEENIIDDFISVEIDDLKFFITHGH----------------------------------------------------------HQSVLEMAIKSGLYDVVIYGHTHERVFEEVD----DVLVINPGELTGIPTIGILDKKEYREIVL--
10	SPARKS	1ii7a	0.148	0.958	1.613	threading_10	MKFAHLADIHLGYEEEEFAEAFKNALEIAVENVDFILIAGDLFH---SSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRSVLNLLEDFGLVYVIGEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKRLFRPTDNAILM--LHQGVREVSEARGEDYFEIGLGDLP-----EGYLYYALGHIHKRYETSYSGGDYEVRYEWDGIYGVNKGFYIVEDFKPRFVEIKV

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.895 to 1s8eA SCOP code=d.159.1.4	TM-score=0.901 to 1s8eA SCOP code=d.159.1.4	TM-score=0.781 to 3d03A SCOP code=d.159.1.11	TM-score=0.803 to 2yvtA SCOP code=d.159.1.6	TM-score=0.907 to 1s8eA SCOP code=d.159.1.4