Template-based Modeling Results for LPOA_ECOLI

Submitted Primary Sequence

>Length 678
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDAQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGSPITLRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRNLSWLQYQQGQVVPVS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDAQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGSPITLRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRNLSWLQYQQGQVVPVS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCEEECCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCEEEEECCEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDAQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGSPITLRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRNLSWLQYQQGQVVPVS
523221031201200000000000000123233322221322232302111211342233211110010020004222222013002202431332122110000010212242220013112322223033310120110101113122112002101222211223212210210120023023310221122232210200010020022133213102200120143133120131012101102212222222101002120301100200220020032122211223112222232233222321312222131110312233212220111020001001112233202020112222202200120242212000020023102201413231100001213323232100000001321022003202423320000001312102200200021034212220111102212201100210111222222111211121012223222322223332222113000000001111012010001111122220100000211322212302220200100200100112231022012113331100001000000010011012132132130311100000133020112020010221111225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDAQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGSPITLRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRNLSWLQYQQGQVVPVS
1	MUSTER	3ckmA	0.320	0.451	1.459	threading_1	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQIGLLLPLSGDGQILGTTIQSGFNDAKG------NSTIPVQVFDTSN-SVQDIIAQAKQAGIKTLVGPLLKQNLDVILADPAQIDVLALNATPNSRAIPQLCYYGLSPEDEAESAANK-WNDGVRNP-LVAPQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPADVTYFVQEN---------------------------------------NSNTTALYAVASPTELAEKGYLTNIV----PNLAIYASSRASASATNTNDFIAQNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQ--LRLYAGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERD-TWYQYQDGAIVPVV
2	PROSPECT2	1qgra	0.087	0.971	2.077	threading_2	MSPDRLELEAAQKFLLPTFLVELSRVLANPGNSQVANSLTSKDPDIKAQYQQRWLAIDANARREVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEIRKEEPSNNVKLAATNALLNSLEFTKANFIMQVVCEATQCPDTRVRVAALQNLVKYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHFYAKGALQYLVPILTQTDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRILEGPEPSQLKPPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYSSSFELIVQKLLEDRPDGHQNNLRSSAYESLMEIVKNSA--------------------KDCYPAVQKTTLVIMERQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGVQEDALMAVSTLVEVLGGEFLKYAFKPFLGIGLKNYAEYQVCLAAVGIPFCDEVMQLLLENLGNENVHRSVKPQLAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLNEKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTAFGKDVLKLVEARPMIHELLTEGRRSKTKLKNQA
3	SPARKS	2h4aa	0.324	0.451	3.791	threading_3	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQIGLLLPLSGDGQILGTTIQSGFNDAK------GNSTIPVQVFDTSN-SVQDIIAQAKQAGIKTLVGPLLKQNLDVILADPIQGDVLALNATPNSRAIPQLCYYGLSPEDEAESAAN-KWNDGVRNP-LVAPQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPADVTYFVQE---------------------------------------NNSNTTALYAVASPTELAEKGYLTNIV----PNLAIYASSRASASANTNTDFIAQNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQ--LRLYAGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERD-TWYQYQDGAIVPVV
4	PROSPECT2	1qsaa	0.086	0.824	2.052	threading_4	--DSLDEQRSRYAQIKQAWMDVVEQMMPGLKDYPLYPYLEDLMNQPAVTVTNFVRANPTPPARTLQSRFVNELARREDWRGLLAFSPEKPGT------TEAQCNYYYAKWNTGQSEEAWQGAKELTGKSQPNACDKLFSVWRIRLAMKAGNTGLVTVLAGQMP-----ADYQTIASAIISLANNPNTVLTFARTTGATDFTR-QMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDERDDAIMRSQSTSLIERRVRMALGT-------------------------------GDRRGLNTWLARLPMEAKEKDEWRYWQADLLLE---------------RGREAEAKEILHQLMQQRG--------FYPMVAAQRIGEEYE---LKIDKAPQNVDSALT-----QGPEMARVRELMYWNL----------------DNTARSEWANLVKS-------KSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEI-------PQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAF-------------VESIPFYRYFMGDKPTLMS
5	PROSPECT2	2h4aA	0.356	0.451	2.131	threading_5	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQIGLLLPLSGDGQILGTTIQSGFNDAK-------------------------------------------------------------------GNSTIPVQVFDTSNS-VQDIIAQAKQAGIKTLVGPLLKQNLDVILADQIQGDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKW--NDGVRNPLVAPQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPADVTYFVQE---------------------------------------NNSNTTALYAVASPTELAEKGYLTN----IVPNLAIYASSRASASATTNTDFIAQNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQ--LRLYAGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERDT-WYQYQDGAIVPVV
6	PPA-I	3ckmA	0.320	0.451	1.778	threading_6	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQIGLLLPLSGDGQILGTTIQSGFNDAKG------NSTIPVQVFDTSN-SVQDIIAQAKQAGIKTLVGPLLKQNLDVILADPAQGDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKW-NDGVRNP-LVAPQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPADVTYFVQEN---------------------------------------NSNTTALYAVASPTELAEKGYLTNIV----PNLAIYASSRASASATNTNDFIAQNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQ--LRLYAGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERD-TWYQYQDGAIVPVV
7	PROSPECT2	1b3ua	0.080	0.811	2.042	threading_7	AAAAVLIDEVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALTLVGGPEYVHCLLPPLESLATVEETVKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCE------------AEVRAAASHKVKEFCENLSADC------------------------------------------RENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIE-------HLLPLFLAQLKDECPEVRLNIISNLDCVNE--------VIGIRQLSQSLLPAIVELAED-----AKWRVRLAIIEYMPLLAGQLGVEF-------FDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTV-------------------------LRMAGDPVANVRFNVAKS------LQKIGPILDNSTLQSEVKPILEKLTQ------------DQDVDVKYFAQEALTVLS----LA
8	HHPRED-l	2h4a_A	0.393	0.447	4.023	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQIGLLLPLSGDGQILGTTIQSGFNDAK---------GNS----------------------------------------------------------TIPVQVFDTS-NSVQDIIAQAKQAGIKTLVGPLLKQNLDVILADPQG-DVLALNATPNSRAIPQLCYYGLSPEDEAESAANK-WNDGVRNPLVA-PQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPADVTYFVQEN--------------------------------------N-SNTTALYAVASPTELAE-KGYLTNIV---PNLAIYASSRASASATNTDFIAQ-NGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQL-RLYA-GADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERD-TWYQYQDGAIVPV-
9	HHPRED-g	2h4a_A	0.352	0.448	4.787	threading_9	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQIGLLLPLSGDGQILGTTIQSGFNDAK------GNSTIPVQVFDTS-NSVQDIIAQAKQAGIKTLVGPLLKQNLDVILADPQG-DVLALNATPNSRAIPQLCYYGLSPEDEAESAANK-WNDGVRNPLVA-PQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPADVTYFVQEN---------------------------------------NSNTTALYAVASPTELAE-KGYLTNI---VPNLAIYASSRASASATNTDFIAQ-NGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQL-RLYA-GADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERD-TWYQYQDGAIVPVV
10	SP3	2h4aa	0.324	0.451	4.162	threading_10	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQIGLLLPLSGDGQILGTTIQSGFNDAK------GNSTIPVQVFDTSNS-VQDIIAQAKQAGIKTLVGPLLKQNLDVILADPIQGDVLALNATPNSRAIPQLCYYGLSPEDEAESAAN-KWNDGVRNP-LVAPQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPADVTYFVQE---------------------------------------NNSNTTALYAVASPTELAEKGYLTNIVP----NLAIYASSRASASATNTTDFIAQNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQ--LRLYAGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERD-TWYQYQDGAIVPVV

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.701 to 3ckmA SCOP code=c.93.1.1	TM-score=0.863 to 3ea5B SCOP code=a.118.1.1	TM-score=0.704 to 3ckmA SCOP code=c.93.1.1	TM-score=0.635 to 1qgkA SCOP code=a.118.1.1	TM-score=0.344 to 1xfdA SCOP code=b.70.3.1