Template-based Modeling Results for LPLT_ECOLI

Submitted Primary Sequence

>Length 397
MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMIGIPVVPIGIGFGALFALAITALWIWQRRH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMIGIPVVPIGIGFGALFALAITALWIWQRRH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMIGIPVVPIGIGFGALFALAITALWIWQRRH
5533232222122301000000100000011000000000021211232011001001000000001000100220221101000200100000000000000000001000000010011000121021210130100110010001000000000011121000000000000000001010131212332322111200200020012023223110000000000000000100011001200212320000000000000000000001101222110200000000000000000012000000000000000000000010001320532101000000100020000000000000001010101000000000000000001112335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMIGIPVVPIGIGFGALFALAITALWIWQRRH
1	MUSTER	1pw4A	0.089	0.987	1.596	threading_1	LPAAEIDPTYLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNLPAGLILAAAVMLFMGFVPWATAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWF-AALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFA-LDKSSWAYFLYEYAGIPGTLLCGWMSRGNRGATGVFFMTLVTIATIVYWMNGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKK-AAGTAAGFTGLFGYLGGSVAASAIVGYTV-GWDGGFMVMIGGSILAVILLIVVMIGEKR
2	SPARKS	2gfpa	0.138	0.914	3.809	threading_2	---------LL-----LMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTMARWMPETRPVDAPRTRLL--------TSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGL-SSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMW--QSVICCLLIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFL--AGTAGALVGGLQNIGSVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPL-------
3	PROSPECT2	1pw4A	0.094	0.992	2.348	threading_3	FKPAPHKARLPAAEIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFAL-SGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWAFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKS-SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKA-AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGE
4	PPA-I	1pw4A	0.081	0.997	2.579	threading_4	ARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVESRGDLGFALSGISIAYGFSKFIMGSVSDRSNLPAGLILAAAVMLFMGFVPWATAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFASSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKK-AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGE
5	HHPRED-l	3o7q_A	0.128	0.947	5.716	threading_5	-------------IPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFAEYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAK--QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGMTAGF-AANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYLIAMALCLISAFAGGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQD-T-KYGSSFI-VMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQT-
6	HHPRED-g	3o7q_A	0.124	0.957	5.079	threading_6	---------RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWEYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAK--QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGMTAGFA-ANYLTGTMVCFFIGRFTGTWLISRFAPHKLAAYALIAMALCLISAFAGGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQD-T-KYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQT-
7	SP3	2gfpa	0.143	0.914	3.481	threading_7	---------LL-----LMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTMARWMPETRPVDAPRTRLLTSY--------KTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGL-SSMTVSILFILPIPAAFFGAWFAGRPNKR--FSTLMWQSVICCLLIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFL--AGTAGALVGGLQNIGSVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPL-------
8	SAM-T99	2gfpA	0.119	0.912	4.391	threading_8	------------------LVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTSTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMNWRACYLFLLVLCAGTFSMARWMPETRPVDAPR--------TRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMT-VSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDMNVWTLLVPAALFFFGAGMLFPLATSGAMEPF-PF-LAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLG--LLMTLMGLLIVLCWLPL----
9	MUSTER	2gfpA	0.140	0.917	1.455	threading_9	---------------LLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTMARWMPETRPVDAPRT--------RLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGL-SSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFL--AGTAGALVGGLQNIGSGVLASLSAMLPQTGGSLGLLMTLMGLLIVLCWLPL-------
10	SPARKS	1pw4a	0.076	0.995	2.970	threading_10	ARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVESRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGPWAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFA-LDKSSWAYFLYEYAGIPGTLLCGWMSRGNRGATGVFFMTLVTIATIVYNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKA-AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGE

Predicted Tertiary Structure


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TM-score=0.919 to 1pw4A SCOP code=f.38.1.1	TM-score=0.914 to 1pw4A SCOP code=f.38.1.1	TM-score=0.705 to 1pv6A SCOP code=f.38.1.2	TM-score=0.909 to 1pw4A SCOP code=f.38.1.1	TM-score=0.918 to 1pw4A SCOP code=f.38.1.1