Template-based Modeling Results for LOLA_ECOLI


  Submitted Primary Sequence

>Length 203
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEEEECCEEEEECCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCCCCHHHEEECCCCCCEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
43110000000000000000121021022103513202010202011232321220101010222210001023223100001121000112223201012133222211001003222211311102233210100122342312100010154220100100233432010102133222022210102114212012334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
1MUSTER2zpdA0.9950.8973.469threading_1---------------------DAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKLPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
2SPARKS2w7qa0.3210.9215.032threading_2-------------GSIAIDDSAAVQRLTGLLNKAQTLTARFSQLTLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQVTIQKLDQRLTQTPALLLSGDISKISESFAITYNVVDFVLKPKTKDTLFDTLRLSFR-SGKVNDMQMIDGVGQRTNILFFDKMNEALDAKQFTFDVPPGVDVIQE--
3PROSPECT22w7qA0.3210.9213.180threading_3GS-------------IAIDDSAAVQRLTGLLNKAQTLTARFSQLTLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQVTIQKLDQRLTQTPALLLSGDISKISESFAITGNVVDFVLKPKTKDTLFDTLRLSFR-SGKVNDMQMIDGVGQRTNILFFDKMNEALDAKQFTFDVPPGVDVIQ--E
4PPA-I2zpdA0.9950.8974.504threading_4---------------------DAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKLPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
5HHPRED-l1iwl_A1.0000.8677.442threading_5---------------------DAASDLKSRLDKVSSFHASFTQKVTD-----VQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQR-
6HHPRED-g1iwl_A1.0000.8726.975threading_6---------------------DAASDLKSRLDKVSSFHASFTQKVTD-----VQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
7SP31iwla0.9940.8724.562threading_7---------------------DAASDLKSRLDKVSSFHASFTQKVTDV-----QEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
8SAM-T992zpdA0.9940.8925.649threading_8---------------------DAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKLPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQR-
9MUSTER2w7qA0.3210.9213.084threading_9-------------GSIAIDDSAAVQRLTGLLNKAQTLTARFSQLTLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQVTIQKLDQRLTQTPALLLSGDISKISESFAITGNVVDFVLKPKTKDTLFDTLRLSFR-SGKVNDMQMIDGVGQRTNILFFDKMNEALDAKQFTFDVPPGVDVIQE--
10SPARKS1iwla0.9940.8724.802threading_10---------------------DAASDLKSRLDKVSSFHASFTQKVTDV-----QEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK

  Predicted Tertiary Structure

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TM-score=0.599 to 1iwmA
TM-score=0.916 to native
SCOP code=b.125.1.2
TM-score=0.599 to 1iwmA
TM-score=0.916 to native
SCOP code=b.125.1.2
TM-score=0.627 to 1iwmA
TM-score=0.837 to native
SCOP code=b.125.1.2
TM-score=0.623 to 1iwmA
TM-score=0.839 to native
SCOP code=b.125.1.2
TM-score=0.599 to 1iwmA
TM-score=0.916 to native
SCOP code=b.125.1.2

  Experimental Structure

Download 2zpcA
SCOP code=b.125.1.2