Template-based Modeling Results for LIVF_ECOLI

Submitted Primary Sequence

>Length 237
MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLGG
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLGG
CCCCCEEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHHHHCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHCCEEEEEECCEEEEEECHHHHHCCHHHHHHHCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLGG
554200101101000040100210002034010000001111010000000010041220200023220231302200421000012222012401011001100111333301210310030012013212342120120110000001001020200001110210011002200200220252200000011002100300110000110100021103102213201221134
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLGG
1	MUSTER	1ji0A	0.483	0.970	3.960	threading_1	VSDIVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKP-AHVINRGIALVPEGRRIFPELTVYENLGAYNR-KDKEGIKRDLEWIFSLFPRLKERLKQLGGTLS-GGEQQLAIGRALS-RPK--LLDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDN-EVRKAYLGV
2	SPARKS	1g6ha	0.302	0.992	4.481	threading_2	-TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPKEEEMVEKAFKILEFL-KLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRIKNVLSDPKVVEIYIGE
3	PROSPECT2	1ji0a	0.487	0.970	4.945	threading_3	VSDIVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHV-INRGIALVPEGRRIFPELTVYENLGAYNRKDKE-GIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQ-LAIGRAL---SRPKLLDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELL-DNEVRKAYLGA
4	PPA-I	1ji0A	0.483	0.970	6.569	threading_4	VSDIVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKP-AHVINRGIALVPEGRRIFPELTVYENLGAYNR-KDKEGIKRDLEWIFSLFPRLKERLKQLGGTLS-GGEQQLAIGRALS-RPK--LLDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDN-EVRKAYLGV
5	HHPRED-l	1ji0_A	0.518	0.962	2.418	threading_5	VSDIVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINR-GIALVPEGRRIFPELTVYENL--GAYNRDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQ-LAIGRAL-SRPKLL--DEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNE-VRKAYLG-
6	HHPRED-g	1ji0_A	0.515	0.966	2.364	threading_6	VSDIVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINR-GIALVPEGRRIFPELTVYENL--GAYNRDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQ-LAIGRAL-SRPKLL--DEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNE-VRKAYLGV
7	SP3	1ji0a	0.500	0.970	4.306	threading_7	VSDIVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKP-AHVINRGIALVPEGRRIFPELTVYENLGAYNRKD-KEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQ-LAIGRAL---SRPKLLDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNE-VRKAYLGV
8	SAM-T99	1ji0A	0.509	0.962	4.250	threading_8	VSDIVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAH-VINRGIALVPEGRRIFPELTVYENL--GAYNRKDKGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQ-LAIGRAL-SRPKL--LDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNE-VRKAYLG-
9	MUSTER	1g6hA	0.303	0.987	2.889	threading_9	-TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPKEEEMVEKAFKILEFL--LSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRIKNVLSDPKVVEIYIGE
10	SPARKS	1ji0a	0.500	0.970	4.443	threading_10	VSDIVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKP-AHVINRGIALVPEGRRIFPELTVYENLGAYN-RKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQ-LAIGRAL---SRPKLLDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNE-VRKAYLGV

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.974 to 1ji0A SCOP code=c.37.1.12	TM-score=0.976 to 1ji0A SCOP code=c.37.1.12	TM-score=0.947 to 1g6hA SCOP code=c.37.1.12	TM-score=0.974 to 1ji0A SCOP code=c.37.1.12	TM-score=0.974 to 1ji0A SCOP code=c.37.1.12