Template-based Modeling Results for LIT_ECOLI

Submitted Primary Sequence

>Length 297
MRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEPGFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKNRLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHHEISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLDGESFSSILGDLLCDISRLTSN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEPGFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKNRLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHHEISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLDGESFSSILGDLLCDISRLTSN
CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEPGFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKNRLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHHEISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLDGESFSSILGDLLCDISRLTSN
552210201210232214103331310220023330100002310010202323233221000210001000000000000021003123332331312233303312200310130012201321233022132123223202100100000000000010010103132222211231121001100210011023103311120000000000021022322112332101022001101211322323101000000010002233120313132022000100010231234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEPGFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKNRLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHHEISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLDGESFSSILGDLLCDISRLTSN
1	PROSPECT2	1hzfa	0.135	0.845	1.412	threading_1	LRLPAASRYLDKTEQWSTLPPETKDHAVDLIQKGYMRIQQFRKADGSYAAWLSRDSS-------------TWLTAFVLKVLSLAQEQ------------VGGSPEKLQETSNWLLSQQQADGSFQDPCPVLDRSQGGLVGND----ETVALTAFVTIALHHGLA---VFQDEGAEPLKQRVEASISKASSFLGEKASAGLLGAHAAAITAYALTL--------------TKAPADLRGVAHNNLAWGQAPALWIETTAYALLHLLLHEGSFQGGFRSTQDTVIALDALSAYWIASHT
2	HHPRED-l	3c37_A	0.211	0.589	1.625	threading_2	------------------------------------------------------KGFN-I------SIEQEKELGNKFAVEIEKQQQPVN------DPEVQRY---VDKVGKRLLSGARAV-EFDYVFKDDSVNAFAPG-GRVYVHTGLLKAELAGVLAHEINHAVARHGAG--SYSREYENQADFLGVET-YKAGYNPNGSFFQKLNA---------------------THPLTSERIQRVQAEIAKLPPQ-------------------RYLTDETEFKKIKGRL-----KLE--
3	HHPRED-g	3c37_A	0.176	0.572	1.420	threading_3	------------------------------------------------------KGFN-I------SIEQE-------KELGNKFAVEIEKQQQ--PVNDPEVQRYVDKVGKRLLSGARAV-EFDYVFKDDSVNAFAI--PGGRVHTGLLKTELAGVLAHEINHAVARHGTG--SYSREYENQADFLGVET-YKAGYN--PN----GLTSFF--QKLNA-----------THPLTSERIQRVQAEIAKLPDETEFKKIKGRLKLE--------------------------------
4	PROSPECT2	3a0oA3	0.079	0.980	1.311	threading_4	GRSALSAFADAVAKDP------NHCGWAEFYEKSVEPWLERPVMPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRDDLLDASRKAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSEAHARIHVFPYDSHAVRSLSAVLTPACIALYTVEFLATLYSPWAGTDAEGPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTKAPGTRRDSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVEAV
5	HHPRED-l	3dte_A	0.130	0.596	1.250	threading_5	-----------------------------------------------------------PTALAKAR-RELAASYGAGL-------PGRDTGLDGITLTF----G-----------QR--DGAY-DPEH---H--VILNSQVR-------PERQRFTLAHEISHALLLGDDDLLSDEQVIETLCNVGAAALL-PAEDDLLTRELARRADVSATSALYALAERTAPPVSRSASAGVKYSLSA---GTPVPDDHP----AALALDT---RLPLAQDSYVPSGRR-PAY-----------
6	PROSPECT2	1yt3A	0.114	0.946	1.221	threading_6	MNDALASLCEAVRAFPAPLGITDWSPLKAILRDPSITKFLFCGRPMSWGDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVE---------TEASGWLPAALDECRLMQMRRQ-------EVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEDALPQPMLNMPGYRKAFKAIKSLITDVSETHLLASRRQINQLLNWHWKLKPQNNLPELGELMAEALHNLLQEYPQ
7	PROSPECT2	1ct9a1	0.099	0.886	1.204	threading_7	LRQALEDSVKSHLMSDVPYGGLDSSIISAITKKYALHSFAVGLPGSPDEVANHLGTVHHEIHFTVQEGLDAIRDVIYHI-----------------ETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKK-----FLDVAMRINPQDKMCKMEKHILRECFEAYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFR------------FPYNTPTSKEAYLYREIFEAAECVPG
8	PROSPECT2	1miva	0.106	0.949	1.191	threading_8	KPQEALGIIQQLKQHGYDALPEDVAIFPKTIDVSKHGTVVVVHKGKAYEVTTFKTDGSVTFVRSLEEDLAVRFVSELTEQAIVQNAPLLAHISVERTEEKLLGGPFAARALPLLAETGLNAYLPGLAGKEKQLRLAAAYRWPWLAAREERWALLCHALGVQESRPFLRA----WKLPNKVVDEAGAILTALADIPRPEAWTNEQLFSAGLERALSVETVRAAFT----GAPPGPWHEKLRRRFASLPIKTKGE----LAVNGKDVIEWVGKP---AGPWVKEALDAIWRRIYAWLER
9	MUSTER	1t5jA	0.126	0.906	0.721	threading_9	MRDILGSVFGAV-GMPTENLT--KEEIKKLYGFVDSYV----EPKNYLAGKLNKGEWTDDTEQAICLIKSLTKEGIDIKKFANCLIAWKNKNPPDIG-------LTSLMAIDKLENNDYSGVDSSSCGAANNLKKLKEEVIKASKINNKTAIAGALAIAFFVSSALKDRKDFSDECYNYIKDIDEEFAKKLLLDYIYDYFGTGVKTDEVVPSAIATYLL------------TDNFKEGMLKCINAG--GDTDSLASMYGAMAGAYYGFKNIPKEIDGLKNKEVIFELAERLYHLATE
10	SPARKS	3sqna	0.068	0.997	0.624	threading_10	PQSISIQLLKELLFTKELVTTSFLSTYETLKRHIK-KNQALRDFHLTIQLTTTIQLIGAESNIRIFYHRLLVPFTFDDYSIHEEHYFQFLKQVYSSELTVETEEIFGACWFFINTIRNKANCRVSQFSFDSKDVLFQLYQPSLAKLYASEGEESFFAFFCFLESWNYDNVYGETLASALHTSQLRKSLQQFVTNLSTEEARPDLIQLLDNLLLLFIKYTESPTLSEQFQLEYQELSKSNQELLEILSIEEPTYFLSLASLLEKQAIYSIQAQTTFLFQGEPAWKAFLQQELAAYLGT

Predicted Tertiary Structure


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TM-score=0.819 to 1hzfA SCOP code=a.102.4.4	TM-score=0.408 to 1xm5A SCOP code=d.92.1.15	TM-score=0.397 to 3dwkC SCOP code=d.2.1.10	TM-score=0.623 to 1j0nA SCOP code=a.102.3.2	TM-score=0.362 to 1rq6A SCOP code=a.4.15.1