Template-based Modeling Results for LIPB_ECOLI

Submitted Primary Sequence

>Length 213
MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHYPVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELVTLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDLSPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHYPVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELVTLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDLSPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCHHHHCCCCCCCEEEECCCCCEEEECCCCEEEEEEEECHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCEEEHHHHHHHCCEEECCEEEEECCCCHHHHCEEECCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHYPVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELVTLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDLSPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA
554220101101112131003002200312343221100002021000113113131111223020010131120000011110000001034232102200210120002002302020102231110102321001000203300001000000112021013000010211200102223230203200220021013104232112135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHYPVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELVTLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDLSPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA
1	MUSTER	2qhsA	0.332	0.948	3.605	threading_1	M---EFLVEDLGLVPYGEAWAYQKRVHREVVAGRPPTLLLLEHPRVITLGRKATGENLLFPNGFELYWVERGGDVTYHGPGQLVGYPIFPVGR---EVRRFLRQIEEAIVRVAAGYGISAYPTPGYAGVWVGEDKLCAIGVAVKEGVSFHGFALNVNTDLNDFTVIVPCGLKGKGVTSLEKLLRKVPMEEAKARVVAAFAEVFGLRPV-----
2	SPARKS	1w66a	0.312	0.962	6.373	threading_2	SKLSAIDVRQLGTVDYRTAWQLQRELADARVAGGADTLLLLEHPAVYTAGRRTETHERPID-GTPVVDTDRGGKITWHGPGQLVGYPIIGLAE-PLDVVNYVRRLEESLIQVCADLGLHAGRVDGRSGVWLPGRKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIVPCGISDAAVTSLSAEGRTVTVDEVRATVAAAVCAALGVLP------
3	PROSPECT2	2qhsA	0.332	0.948	4.412	threading_3	M---EFLVEDLGLVPYGEAWAYQKRVHREVVAGRPPTLLLLEHPRVITLGRKATGENLLFPNGFELYWVERGGDVTYHGPGQLVGYPIFPVGR---EVRRFLRQIEEAIVRVAAGYGISAYPTPGYAGVWVGEDKLCAIGVAVKEGVSFHGFALNVNTDLNDFTVIVPCGLKGKGVTSLEKLGRKVPMEEAKARVVAAFAEVFGLRPV-----
4	PPA-I	2qhsA	0.327	0.948	6.130	threading_4	---MEFLVEDLGLVPYGEAWAYQKRVHREVVAGRPPTLLLLEHPRVITLGRKATGENLLFPNGFELYWVERGGDVTYHGPGQLVGYPIFPVGR---EVRRFLRQIEEAIVRVAAGYGISAYPTPGYAGVWVGEDKLCAIGVAVKEGVSFHGFALNVNTDLNDFTVIVPCGLKGKGVTSLEKLLRKVPMEEAKARVVAAFAEVFGLRPV-----
5	HHPRED-l	1w66_A	0.312	0.962	7.005	threading_5	IRSKAIDVRQLGTVDYRTAWQLQRELADARVAGGADTLLLLEHPAVYTAGRRTETHERP-IDGTPVVDTDRGGKITWHGPGQLVGYPIIGLAE-PLDVVNYVRRLEESLIQVCADLGLHAGRVDGRSGVWLPGRKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIVPCGISDAAVTSLSELGRTVTVDEVRATVAAAVCAALDGVL------
6	HHPRED-g	1w66_A	0.311	0.967	7.641	threading_6	IRSSAIDVRQLGTVDYRTAWQLQRELADARVAGGADTLLLLEHPAVYTAGRRTETHERPID-GTPVVDTDRGGKITWHGPGQLVGYPIIGLAE-PLDVVNYVRRLEESLIQVCADLGLHAGRVDGRSGVWLPGRKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIVPCGISDAAVTSLSELGRTVTVDEVRATVAAAVCAALDGVLP-----
7	SP3	1w66a	0.311	0.967	6.445	threading_7	SKLSAIDVRQLGTVDYRTAWQLQRELADARVAGGADTLLLLEHPAVYTAGRRTETHERPID-GTPVVDTDRGGKITWHGPGQLVGYPIIGLAE-PLDVVNYVRRLEESLIQVCADLGLHAGRVDGRSGVWLPARKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIVPCGISDAAVTSLSAEGRTVTVDEVRATVAAAVCAALDG----VLP-
8	SAM-T99	1w66A	0.310	0.953	7.833	threading_8	--LSAIDVRQLGTVDYRTAWQLQRELADARVAGGADTLLLLEHPAVYTAGRRTETHERPID-GTPVVDTDRGGKITWHGPGQLVGYPIIGLAE-PLDVVNYVRRLEESLIQVCADLGLHAGRVDGRSGVWLPARKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIVPCGISDAAVTSLAELGRTVTVDEVRATVAAAVCAALDGVL------
9	MUSTER	1w66A	0.311	0.967	3.534	threading_9	SKLSAIDVRQLGTVDYRTAWQLQRELADARVAGGADTLLLLEHPAVYTAGRRTETHERP-IDGTPVVDTDRGGKITWHGPGQLVGYPIIGLAE-PLDVVNYVRRLEESLIQVCADLGLHAGRVDGRSGVWLPGRKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIVPCGISDAAVTSLSAELRTVTVDEVRATVAAAVCAALDGV----LP-
10	SPARKS	2qhsa	0.327	0.948	6.174	threading_10	---MEFLVEDLGLVPYGEAWAYQKRVHREVVAGRPPTLLLLEHPRVITLGRKATGENLLFPEGFELYWVERGGDVTYHGPGQLVGYPIFPVGR---EVRRFLRQIEEAIVRVAAGYGISAYPTPGYAGVWVGEDKLCAIGVAVKEGVSFHGFALNVNTDLNDFTVIVPCGLKGKGVTSLEKLGRKVPMEEAKARVVAAFAEVFGLRPV-----

Predicted Tertiary Structure


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TM-score=0.877 to 1w66A SCOP code=d.104.1.3	TM-score=0.953 to 1w66A SCOP code=d.104.1.3	TM-score=0.947 to 1w66A SCOP code=d.104.1.3	TM-score=0.873 to 1w66A SCOP code=d.104.1.3	TM-score=0.874 to 1w66A SCOP code=d.104.1.3