Template-based Modeling Results for LIGT_ECOLI

Submitted Primary Sequence

>Length 176
MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ
CCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ
55421000000201330131012013222423203102131000000001302231031002001303432020101100012212000000222241012002101210250202323431101000011223122212212312110210000101114341201011202146
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ
1	MUSTER	1iuhA	0.312	0.966	3.119	threading_1	----MRLFYAVFLPEEVRAALVEAQTKVRPFRGWKPVPPHQLHLTLLFLGERPEEELPDYLALGHRLAEAPFRARLRGTGYFPTPRVWFAKAE--AEGFLRLAEGLRAGVEELRIPGWDKPFKPHITLARRKAPAPRVPPVLFGLEWPVEGFALVRSELKPKGPVYTVLEKFSLRG
2	SPARKS	1iuha	0.312	0.966	4.367	threading_2	----MRLFYAVFLPEEVRAALVEAQTKVRPFRGWKPVPPHQLHLTLLFLGERPEEELPDYLALGHRLAEAPFRARLRGTGYFPTPRVWFAKAE--AEGFLRLAEGLRAGVEELRIPGWDKPFKPHITLARRKAPAPRVPPVLFGLEWPVEGFALVRSELKPKGPVYTVLEKFSLRG
3	PROSPECT2	1iuhA	0.318	0.966	3.176	threading_3	M----RLFYAVFLPEEVRAALVEAQTKVRPFRGWKPVPPHQLHLTLLFLGERPEEELPDYLALGHRLLEAPFRARLRGTGYFPTPRVWFAKAE--AEGFLRLAEGLRAGVEELRIPGWDKPFKPHITLARRKAPAPRVPPVLFGLEWPVEGFALVRSELKPKGPVYTVLEKFSLRH
4	PPA-I	1iuhA	0.312	0.966	4.170	threading_4	----MRLFYAVFLPEEVRAALVEAQTKVRPFRGWKPVPPHQLHLTLLFLGERPEEELPDYLALGHRLAEAPFRARLRGTGYFPTPRVWFAKAE--AEGFLRLAEGLRAGVEELRIPGWDKPFKPHITLARRKAPAPRVPPVLFGLEWPVEGFALVRSELKPKGPVYTVLEKFSLRG
5	HHPRED-l	1iuh_A	0.312	0.966	6.416	threading_5	----MRLFYAVFLPEEVRAALVEAQTKVRPFRGWKPVPPHQLHLTLLFLGERPEEELPDYLALGHRLAEAPFRARLRGTGYFPNEPRVWFAKA-EAEGFLRLAEGLRAGVEELRIPGWDKPFKPHITLARRKAPAPRVPPVLFGLEWPVEGFALVRSELKPKGPVYTVLEKFSLR-
6	HHPRED-g	1vgj_A	0.240	0.949	5.526	threading_6	-----RAFIAIDVNESVRDSLVRAQDYIGSKAKIKFVERENLHITLKFLGEITEEQAEEIKNILKKIKYKKHEVKVKGIGVFPNIRVIWAGIE-NDEIIRE-AREIEDELAKLGFKKE-GNFVAHITLGRVKF-KLKELANEDFGSFVVDAIELKKSTLTPKGPIYETLARFELSE
7	SP3	1iuha	0.312	0.966	4.625	threading_7	----MRLFYAVFLPEEVRAALVEAQTKVRPFRGWKPVPPHQLHLTLLFLGERPEEELPDYLALGHRLAEAPFRARLRGTGYFPNPRVWFAKAEAE--GFLRLAEGLRAGVEELRIPGWDKPFKPHITLARRKAPAPRVPPVLFGLEWPVEGFALVRSELKPKGPVYTVLEKFSLRG
8	SAM-T99	2fyhA	0.238	0.955	5.249	threading_8	----MRAFIAIDVSESVRDALVRAQDYIGSKEKIKFVERENFHITLKFLGEITEEQAEEIKKILEKIKYKKHEVNVRGIGVFPYVRVIWAGVEND-EIIKKIAKEIDDELAKLGFKKEG-NFVAHITLGRVKFVKDKLGLAEDFGSFIVEAIELKKSTLTPKGPIYETLARFEL--
9	MUSTER	2fyhA	0.235	0.966	2.918	threading_9	----MRAFIAIDVSESVRDALVRAQDYIGSKEKIKFVERENFHITLKFLGEITEEQAEEIKKILEKIAYKKHEVNVRGIGVFPNPRVIWAGVE-NDEIIKKIAKEIDDELAKLGFKKE-GNFVAHITLGRVKFMKLKELANEDFGSFIVEAIELKKSTLTPKGPIYETLARFELSE
10	SPARKS	1vdxa	0.241	0.966	4.262	threading_10	----MRAFIAIDVNESVRDSLVRAQDYIGSKEKIKFVERENLHITLKFLGEITEEQAEEIKNILKKIKYKKHEVKVKGIGVFPYIRVIWAGIE-NDEIIREMAREIEDELAKLGFKKE-GNFVAHITLGRVKFVKLKELANEDFGSFVVDAIELKKSTLTPKGPIYETLARFELSE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.936 to 1iuhA SCOP code=d.61.1.2	TM-score=0.933 to 1iuhA SCOP code=d.61.1.2	TM-score=0.936 to 1iuhA SCOP code=d.61.1.2	TM-score=0.935 to 1iuhA SCOP code=d.61.1.2	TM-score=0.936 to 1iuhA SCOP code=d.61.1.2