Template-based Modeling Results for KUP_ECOLI


  Submitted Primary Sequence

>Length 622
MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKHGTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIALGAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLILGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKHGTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIALGAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLILGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI
CCCCCHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKHGTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIALGAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLILGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI
5533323210000000000000001000000012002131212223210100000000000000002000000101222311000000000321222110000000000000011211010110000112202111231321100000000000000232021110311000000000000000021002112002000010001001313110010000000000001000021120031101000000000000010000000003023114100010012000000000000000000100010001002100401100101010114232110000100000000000000001302100200000000010000000000012211111000000000000010000000013022100000000000000000031111201221242212231002103322223020000000212320210001003213111110000002011112144221020220131000000000143223032001200322021322200000001101224512113000100000120012002113013321011011023
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKHGTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIALGAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLILGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI
1SPARKS2bkub0.0870.8501.011threading_1IDENTKLEGRILAALTLK----NELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTAPRIANAAAQLIAAIIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADALVSSSNNILIAIV-QGAQSTETSKAVRLAALNALADSL-------IFIKNNMEREGERNYLMQVVCEATQ-AEDIEVQAAA-FGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPN-------DKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLVSMSAGACLQLFAQNCGNHILEP-VLEFVEQNITADN-------WRNREAAVMAFGSIMDGPD-----------KVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSV-----AESIDPQQHLPGVVQACLIGL----QDHPKVATNCSWT----IINLVEQLAEATPS----------PIYNFYPALVDGLIGAANRIDNRASAFSALTTMVEYATDTVAETSASI-------------------STFVMDKLGQTMSVDENQLT---------LEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGL--FFRL
2PPA-I3gi9C0.1490.6821.572threading_2MELKNKKSLWEAVSMAVGVMIG----ASIFSIFGVGAKIAGR------NLPETFILSGIYALLVAYSYTKLGAKIVSNA-GPIAFIHKAIGDNIITGALSILLWMSYVISIALFA-------KGFAGYFLPL--IAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLIT-------IHPSYVIPDLAPSAVSGMIFASAIFFSYMGFGVITNASEHIEKKNVPRAIFISILIVMFVYVGVAISAIGNLPKASENAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEF----FERKVWFK---STEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITN---------RFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKSLES-----------------------------------------------------------------------------------------------------------------------------------------------------------
3SPARKS2xwub0.0890.9601.007threading_3FASGSKIVLTRLCVALASLAMPDAWPCAVADMVRLFQAPVDGQGRCLALLELLTVLPEEFQTLPQYRKGLVRTSLAVECGAVFPLLEQLLQQPSSPRQKVLKCFSSWVQLEVPLQDALQDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLQEQLRQAVQNGDMETSH----GICRIAVALGENHSRALLDQVEHWQSFLLVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDDILSFEAQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLT------------SYSWQ-----HTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRIVQLADTVMFTIGALSEWDHPVMINSVLPLVLHPELSVSSVSTLKKICRPPYAANIVAVSQDVLIHK-TSQCMWLMQALGFLALQVEEILKNLHSLISPYIQQLEKLAEEIPNPILGLLSNLFTTLDISHPNPVFQLIQKVLSKWLNDAQEKSVKTLLDDFLCEMLGRMYSTIPQAALDLTRQLVHIFAHEPAHFPVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALKRKPDLFLCERLDVKAV---FQC
4HHPRED-l3gia_A0.1440.6611.584threading_4--LKNKLSLWEAVSMAVGVMIGSIFSIFGVGAKIA--G-----R--N---LPETFILSGIALLVAYSYTKLG--AKIVSNAGP---IAFIHKAIGDN------IITGALSILLWMSYVISIALFAKGFAGYFLPLINAPITNIAITEIGIVAFFTALNFFGSKAVGRAIVLVKLLILGLFIFAGLIT--IHPSYVIPDAPS---------AVSGMFASAIFFLSYMGFGVITNASEHIENKNVPRAIFISI-LIVMFVYVGVASAIGNLPIEAENALAVAAGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFF-ERKVW--F-KSTEGLY--ITSALGVLF-ALLFNMEGVASITSAVFMVIYLFVILSH-YILIDEVGGRKEIVI--FSFIVVLGVFLL-LLYYQWIT-NRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNN--MYV--KS--------------------------------------------------------------------------------------------------------------------------------------------------------------
5PROSPECT22bkuB0.0780.9652.015threading_5MSTAENDNFLQFAGLSSQVLIDENTKLEGRILAALTLKNELVSKDSVKTQQFAQRWITQNAAAQLIAAIADIELPHGAWPELMKIMVDNT--GAEQPENVKRASLLALGYMCESADALVSSSNNILIAI--VQGAQSTETSKAVRLAALNALADS------LIFIKNNMEREGERNYLMQVVCEATQ-AEDIEVQAAA--FGCLCKIMS----KYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLSAGACLQLFAQNCGNHILEPVLEFVEQNITADNWRNREIMDGPDKVQRTYYVHQALPSILNLMN--DQSLQVKETTAWCIGRIADSVAESVVQACLIGLQDHPKVATNCSWTIINLVEQLLVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLTVLAAVIRKSPSSVEGLFFRLLEKKDSAFIEDDVFYLNQVDSPSLEEDFRRYSDAMMNVLAQM---ISNPNARRLNDIMALCVAAQNTKPENGTLEALDYVGIVAGLHDKPEALFGTIFQFIAQVAEDPQLYSEFPDGSIKQFYGQLSL
6HHPRED-g3gia_A0.1520.6581.913threading_6--LKNKKSLWEAVSMAVGVMIGSIFSIFGVGAKIA--G-------RN---LPETFILSGIYLLVAYSYTKL--GAKIVSNAGPIAF---IHKAIGDN------IITGALSILLWMSYVISIALFAKGFAGYFLPLINAPITNIAITEIGIVAFFTALNFFGSKAVGRAEVLVKLLILGLFIFAGLIT--IHPSYVIPDAPSAVSGMI--------FASAIFFLSYMGFGVITNASEHIENKNVPRAIFISILIYVGVAISAIGNLPIDELIKAENALAVALGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEF-FERKVW--F-KSTEGLY-I-TSALGVLFA-LLFNMEGVASITSAVFMVIYLF-VILSHYILIDEVGGRKEIVI--FSFIVVLGVFLLLLYY-QWIT-NRFVFYGIIATFIGVLIYRKVTK----RTFSNNMYVK----S--------------------------------------------------------------------------------------------------------------------------------------------------------------
7SP33ob6a0.1390.6591.259threading_7-ADAHKVGLIPVTLMVSGNI---MG-SGVFLLPANLASTGGI----AIYGWLVTIIGALGLSMVYAKMSFLDPSP-----GGAYARRCF-----------GPFLGYQTNVLYWLA---CWIGIAMVVIGVGLSYFFPILKDVLTITCVVVLWIFVLLNIVGITRVQAVATVLALIPIVGIAVFGWFWF--RGETYMAAWNVSGLGTFGAIQSTLNVTLGVESASVAAGVVPKRNVP----IAGGVLIAAVCYVLSTTAIMGIPNAALRVSASPFGDAARALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPI-FARVNKA-----GTPVAGLIIVGILMTIFQLSSISPGLVSSVSVIFTLVPYLYTCAALLLLHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKE----VMWSFVTLMVITAMYALNYNRL------HKNPYPLDA------------------------------------------------------------------------------------------------------------------------------------------------------------------
8PROSPECT21u6gC0.0920.9951.975threading_8MTSSDKDFRFMATNDLMTELQKDSIKLDVKMILKLLEDKNGSKVKEYQVETIVDTLCTNMLRDISSIGLKTVIGELPSALAANVCTGRLTSAAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSIRTIIALGHLVMSCFVDLIEHLLSELSCIAAISRQAGHRIGEYLEKIIPLVVKFCCIQAFESFVRRSTIINICLKAKCLDAVVSTRHEMLPEFYKKADVFHAYLSLLKQTRPVGETPLTMLIVKALHKQTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKIIRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLPNTLQIFLERLKNEITRLTTVKALTLILKLGTLSALDILIKNYSDSLTAAMIDAVLQMAISFLTTLAKVYPSSLSKISGSMLDFFQALVVTGTNNLGYMDLLTGPVYSQTHKQSYYSIRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLS---LGEVGHHIDLSGQLELKSVILEAFSSPSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAKFTISDHPQPIDPLLKNCII
9PPA-I3l1lA0.1120.6591.283threading_9AHKVGLIPVTLMVSGAI------MG-SGVFLLPANLASTGG-----------IAIYGWLVTIIGALGLSMVYMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMV-------VIGVGYLSYF-FPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRV--QAVATVLALIPIVGIAVFGWFWFRGETYMAAIQSTLNVT----LWSFIGVESASVAAGVVPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPI-FARVNKAGT-----PVAGLIIVGILMTIFQLSSITKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHPAYLAVTTIAFLYCIWAVVGSGAKE------VMWSFVTLMVITAMYALNYNRL------HKNPYPLDA------------------------------------------------------------------------------------------------------------------------------------------------------------------
10PROSPECT21w63A0.0980.8711.968threading_10MPA----------------------PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLD---------ERQDVHLLMTNCIKNDLNHSTQ------FVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNL--LNEKNHGVLHTSVVLLTE----MCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSG----ISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSK-----------------NVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKKRRAMELSFALVNGNMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRV-------LTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVYNALFKKYDHMRSALRMPVM---------EK

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.696 to 1kpkA
SCOP code=f.20.1.1
TM-score=0.712 to 3ea5B
SCOP code=a.118.1.1
TM-score=0.733 to 1qgkA
SCOP code=a.118.1.1
TM-score=0.619 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.562 to 3ea5B
SCOP code=a.118.1.1