Template-based Modeling Results for ATKA_ECOLI

Submitted Primary Sequence

>Length 557
MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTTGVERVLFRALGVSDREMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLALNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSMSTLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGPVASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVMGDRRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGTDSSINMEGKESRFGVLVSSLFAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVFIAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLVSKKSQAASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTTGVERVLFRALGVSDREMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLALNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSMSTLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGPVASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVMGDRRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGTDSSINMEGKESRFGVLVSSLFAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVFIAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLVSKKSQAASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTTGVERVLFRALGVSDREMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLALNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSMSTLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGPVASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVMGDRRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGTDSSINMEGKESRFGVLVSSLFAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVFIAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLVSKKSQAASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS
44130011000000000000200020002002221120110011000200102343120220000000000000000000000131011113312111120000000000110222111121110000100000011000100000000000100122222200100000000001000000000000012210122122222011031220102201100120031002111000101011113111001100100000000000000001112233200000000000000000010002121121011011311121301101000100000000110020000100010000100000000010020011020000000000000000100112130131013313232011000000000001100000111022022112121110001000000100211010010011101000000000100010010000000001012232112121112121111100000001111222110011102113215
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTTGVERVLFRALGVSDREMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLALNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSMSTLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGPVASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVMGDRRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGTDSSINMEGKESRFGVLVSSLFAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVFIAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLVSKKSQAASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS
1	MUSTER	3pjzA	0.164	0.768	1.033	threading_1	MQFRSIIRIVGLLLALFSVTMLAPALVALLYRDGAGVPF-VTTFFVLLFCGAHKHELKRDGFLIVVLFWTVLGSAGSLPFLI----------DNPNISVTDAFFESFSALTTTGATVIVGLDELP----KAILFYRQFLQWFGGMGIIVLAVAILPVLGIGGM---IAETAKALWYIYLSLTIACAVAFWLAGMT----------------------FDAISHSFSTIAI--GGFSTHDASMGYFD-SYAINLITVVFLLISACNFTLHFAAFASGGPEFRAFIFIQVLLFLVCFLLLLKHHSYTS--PYD-----------------AFDQALFQTVSISTTAGFTTTGFADWPLFLPVLLLFSSFIGGCA-GSTGGGMKVIRILLLTLQGARELK-AVYTIKVGGSALPQRVVDAVWGFFSAYALVFVVCMLGLI-------------MDELSAFSAVAATLNNLGPGLGEVALHFDKAKWVLIVSMLFGRL--IFTLLIL--------------------TPTF------------------------------
2	SPARKS	3pjza	0.180	0.786	2.210	threading_2	MQFRSIIRIVGLLLALFSMLAPA---LVALLYR--DGAGVPFVTTFFVLLFCHKHELKRDGFLIVVLFWTVLGSAG---------SLPFLIADNPNISVTDAFFESFSALTTTGATVIVGLDELP----KAILFYRQFLQWFGGMGIIVLAVAILPVLGIGGMTPRIAETAKALWYIYLSLTIACAVAFWLAGM--------------TPFDAISH-------SFSTIAI--GGFSTHDASMGFDSYAINLITVVFLLISACNFTLHFAAPKYYWKDPEFRAFIFIQVLLFLVCFL-----------LLLKHHSYTSPYD--------AFDQALFQTVSISTTAGFTTTGFADWPLFLPVLLLFSSFIGGCA-GSTGGGMKVIRILLLTLQGARELKRLVHPRAVGGSALPQRVVDAVWGFFSAYALVFVVCMLGLIAT---------G-MDELSAFSAVAATLNNLGPGLGEVALHNDKAKWVLIVSMLFGR-LEIFTLLIL--------LTPTFWR---------------------------------------
3	PROSPECT2	2bkuB	0.107	0.977	2.086	threading_3	MSTAEFAQLLEFAGLSSQVLVKTQQFAQRWITQVSPEAKNQIKTNALTALVSIEPHGAWPELMKIMVDNNVKRASLLALGYMCESADALVSSQSTETSKAVRLANALADSLIFIKNNMEREGERNYLMQVVATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTKVASMTVEFWSTICEEEIDIAYELAQFPQSP-----------LQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFANREAAVMAFGSIMDGPDKVQRTQVKETTAWCIGRIADSVAESIDPQLVEQLAEATPSPINRIDNEFNARASAFSALTTMVEYATTVAETSASISTF--VMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMAQNTKPENGTLELHDKPEALFPYVGTIFQFIAQVAEDPQLLIGDIAAMFP
4	PPA-I	3pjzA	0.135	0.799	2.243	threading_4	MQFRSIIRIVGLLLALFSVTMLAPALVALLYRDGAGVPFVTTFFVLLFCGAMHKHELKSRDGFLIVVLFWTVLGSAGSLPFLIADNPN--------ISVTDAFFESFSALTTTGATVIVGLDELP----KAILFYRQFLQWFGGMGIIVLAVAILPVLGIGGMTPRIAETAKALWYIYLSLTIACAVAFWLAGMT---------------------PFDAISHSFSTIAI--GGFSTHDASMGYFD-SYAINLITVVFLLISACNFTLHFAAFASGGKDPEFRAFIFIQVLLFLVCFLLLLKHHSYTSPYD-----------------AFDQALFQTVSISTTAGFTTTGFADWPLFLPVLLLFSSFIGGCA-GSTGGGMKVIRILLLTLQGARELKRAVYTIKVGGSALPQRVVDAVWGFFSAYALVFVVCMLGLIATG----------MDELSAFSAVAATLNNLGPGLGEVALHNDKAKWVLIVSMLFGRLEIFTLLILLTPTFWR------------------------------------------------
5	HHPRED-l	3pjz_A	0.150	0.765	3.487	threading_5	MQFRSIIRIVGLLLASVTMLAPAL--VALLYRDGAGPFVTTFFVMCWFPNRRHKHELKSRDGFL--------IVVLFWTVLGSAGSLPFLIADNPNISVTDAFFESFSALTTTGATVIVGLDELPFLQWFGGMGIIVLAVAILGM------------------TPRIAETAKALWYIYLSLTIACAVAFWLAGMT-------------------------PFDAISHSTIAIGGFSTHASMGYFDS--YAINLITVVFLLISACNFTLHFAA-FASGGHPKYYFRAFIFIQVLLFLVCFLLLLKH------------HSYTSPY---DAFDQALFQTVSISTTAGFTTTGFADWPLFLPVLLLFSSFIGGC-AGSTGGGMKVIRILLLTLQGARELKRLVHIKVGGSALPQRVVDAVWGFFSAYALVFVVCMLGLIAT-----------GMDELSAFSAVAATLNNLGPGLGHFGDVNDKAKWVLIVSMLFGRLEIFTLLILLTPTFW-R-----------------------------------------------
6	HHPRED-g	3pjz_A	0.160	0.763	3.644	threading_6	MQFRSIIRIVGLLLALFTMLAPAL--VALLYRDGAGPFVTTFFAMCWFPNRRHKHELKSRDGF---LIVVLFWTVL-----GSAGSLPFLIADNPNISVTDAFFESFSALTTTGATVIVGLDELQFLQWFGGMGIIVLAVAIGGM------------------TPRIAETAKALWYIYLSLTIACAVAFWLAGMT-------------------------PFDAISHSTIAIGGFSTHDSMGYFDSY--AINLITVV--FLLISACNFTLHFAAFAGGVPKYEFRAFIFIQVLLFLVCFLLLLKH------------HSYTSPY---DAFDQALFQTVSISTTAGFTTTGFADWPLFLPVLLLFSSFIGGCA-GSTGGGMKVIRILLLTLQGARELKRLVHIKVGGSALPQRVVDAVWGFFSAYALVFVVCMLGLIAT-----------GMDELSAFSAVAATLNNLGPGLGHFGDVNDKAKWVLIVSMLFGRLEIFTLLILLTPTF-WR-----------------------------------------------
7	SP3	2xwub	0.125	0.987	0.498	threading_7	VECGAVFPLLEQLLPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSELLGLQEQLRQAVQNMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTLTFWYTLQDDILEKQAVYQQVRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQFRIYRVDISDTLMY--VYEMLGAELLSNLYDKLGRLLSYSWQHTEALLYGFQSIAETIIGLIPRISISNVQLADTVMFTIGSEWLPVMINSVLPLVLHALGN--PELSVSSVSTLKKICRECKYDLP--PYAANI-VAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISHPNPVVVVKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPCEMLGRMYSTIPQAALDLTRQLVHIFAHEPAHFPPIEALLLVTSVTLTLFQQGPRPDIVDSFMQLLAQALKRLCERLDALKFPEAPTVKASCGFFTELLPRAIGGASRSLMDCFADILF
8	SAM-T99	2q5rA1	0.201	0.312	0.728	threading_8	------------------GLVPRGSHILTLTLNPSYPLTALKLDDVNRVQEVSK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGKGLNVTRVLAQVGEPVLASGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEILEPEIDNQEAAGFIKHF-----------------------------------------------EQLLEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGATLQTVLE
9	MUSTER	3dh4A	0.121	0.804	0.863	threading_9	LP---WWAVGASLIAANISAEQFIGMSGSGYSIGL-------------------------AIASYEWMSAITLIIVGKYFLPIFIEK--------GIY------TIPEFV-----KRFNK--KLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPL-MYSILGLALFALVYSIVVWTDVIQVFFLVLGGF---MTTYMAVSFIGGTDGWF----AGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWGF-YIIQRTLAAKQKGIVFAAFLKLIVPFLVVLPGIAAYVSDPQLMASLGDIAATNLP----SAANADKAYPWLTQF-------------LPVGVKGVVFAALAAAI------VSSLASMLNSTATIFTMDIY----KEYISPDSG--DHKLVNVGRTAAVVALIIACLIAPM-------LGGIG--QAFQYIQEYTGLVS--PGILAGLKTTSAIIGVVASIPFALFLKFPFMDQMLYTLLFT--KGISVTSSMFVTDRS-FNIAAYGIMIVLAVLTLFWVLYK--------
10	SPARKS	1lam_	0.140	0.729	0.879	threading_10	FTSAGENFNKLVSGKLREILNISG------PPLKAGKTREDFPSVV--VVGLGKKTAGIDEQENWHEGKENIRAAVAAGCRQIQD------LEIPSVEVDPCAQAAAEGAVLGLYEDLKQKRKVVVSAKLHGSEDQEAWQRGVLFASGQNLARRLMETPANEMT--PTKFAEIVEENLKSA-----------------SIKTDVFIRP-------------KSWIEEQEM--GSFLSVAKGSE-EPPV----FLEIHPLVFVGKGITFNMDLMRADMGGAATICSAIVSAAKLDVGLAPLCENMPSGKANKPG-DVVRARNGKTIQVDAEGRLILADALCYAHTFNPKVIINAATLTGAMDIAL----GSGATGTNSSWLWNKLFEASIET---GDRVWRMPHYT------RQVI-----------------------DCQLADVNNKYRSAGACTAAAFLKEFVTHPAGVMTNKDEVPYLRKTRTLIEFLFRFSQ-------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.400 to 2r2vA SCOP code=h.1.3.1	TM-score=0.422 to 1xl6A SCOP code=b.1.18.16	TM-score=0.428 to 2r2vA SCOP code=h.1.3.1	TM-score=0.690 to 3ea5B SCOP code=a.118.1.1	TM-score=0.417 to 1et1A SCOP code=j.15.1.1