Template-based Modeling Results for KDGT_ECOLI

Submitted Primary Sequence

>Length 327
MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK
CCHHHHCCCCCCCEEHHHHHHHHHHHCCCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK
451232133021000000000000010001100310110010012001000000000100102032022102210000001000000000000200233113101100000000000011010000000032111231000000000210000000000011212131200000000000000101013301200340120000000000011010210041012000100001101010000002101223110000000000000000000031011022002000010000000000001000110033131112313223224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK
1	MUSTER	3zuxA	0.186	0.887	1.152	threading_1	IKISSFIGK----TFSLWAALFAAAAFFAPDTFKWAGPY-------IPWLLGIIMFGMGLTLKFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEI------AVGVILVGCCPGGTASNVMTYLAR-GNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEMSIVKMVLLPIVLGLIVGSKTEKLTDALPLVSVAAIVLIIGAV-VGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQ-KALTIEVGMNSGLAAALAAA--HFAA-APVVAVPGALFSVWHNISGSLLATYWAAKA--------------
2	SPARKS	3zuxa	0.191	0.881	1.132	threading_2	SKISSFIGK----TFSLWAALFAAAAFFAPDTFKWAGPY-------IPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCCPG--GTASNVMTYLAR--GNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPVLIIGAVVG----ASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQ-KALTIEVGSGLAAALAAAHF-----AAAPVVAVPGALFSVWHNISGSLLATYWAAKA--------------
3	PROSPECT2	1ee4a	0.115	0.988	1.588	threading_3	QELPQMTQQLNSDLSATVKFRQILSREHRPPIDVVAGVVPRLVEPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLVKEQAIWALGNVAGDSTDYRDYVLAMEPIWTLSNLCRGKKQALPTLAKLIYSMDTDACWAISYLSDGPQEAIQAVIDVRILSHESTLVQTPAL-RAVGNIVTGNDLQTQVVINAG---VLPALRLLLSSPKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAISNASSGGLIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEAYEKAYKIIETYF
4	PPA-I	3zuxA	0.186	0.890	2.398	threading_4	-NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPY-------IPWLLGIIMFGMGLTLKFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEI------AVGVILVGCCPGGTASNVMTYLAR-GNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEMSIVKMVLLPIVLGLIVGSKTEKLTDALPLVSVAAIVLIIGAV-VGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQ-KALTIEVGSGLAAALAAAHFAAA-----PVVAVPGALFSVWHNISGSLLATYWAAKA--------------
5	HHPRED-l	3zux_A	0.182	0.872	3.964	threading_5	-NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAG-------PYIPWLLGIIMFGMGLTLKPSDFDILFKHVIIGVIAQFAIMPATAWCLSKLLNLPAE---IAVGV---ILVGCCPGGTASN-V-MTYLARNVALSVAVTSVSPLLTPAIFLMLAGEM--LEIQAAGMKMVLLPIVLGLIVHKVLGSKTEKLTDALPVLIIGAVVG----ASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWT-GLPYDAQKALTIGMQNSLAAALAAAHFA-A-APV---VAVPGALFSVWHNISGSLLATYWAAKA--------------
6	HHPRED-g	3zux_A	0.182	0.872	4.635	threading_6	-NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAG-------PYIPWLLGIIMFGMGLTLKPSDFDILFKHVIIGVIAQFAIMPATAWCLSKLLNLPA---EIAVGVI---LVGCCPGGTASN-V-MTYLARNVALSVAVTSVSPLLTPAIFLMLAGEM--LEIQAAGMKMVLLPIVLGLIVHKVLGSKTEKLTDALPVLIIGAVVG----ASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWT-GLPYDAQKALTIEMQNSLAAALAAAHFA-A-APV---VAVPGALFSVWHNISGSLLATYWAAKA--------------
7	SP3	3zuxa	0.187	0.884	0.588	threading_7	IKISSFIGKT----FSLWAALFAAAAFFAPDTFKWAGPY-------IPWLLGIIMFGMGLTLKPSDFDILFPKVVIIGVIAQFIMPATAWCLSKLLNLPAE---IAVGVILVGCCPG---GTASNVMTYLAR-GNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVVAAIVLIIGAGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQ-KALTIEVGSGLAAALAAAH----F-AAAPVVAVPGALFSVWHNISGSLLATYWAAKA--------------
8	SAM-T99	3clqB2	0.231	0.477	0.675	threading_8	-----------------------------------------------------------------------------IVTTCRNGVEFGIRVSGIGGNHWF-----TGPAQRVIGPFAGYT--------------QEDAGLDGDSAITE-------TYGVGGFAAAAPAI-----VPLVGGTVAENYSKELEITTKENPNVTIPVLDFGIPTGIDVLKVLETGLPVINTAI----------------AHKEPGIGIGAGLT---------------NPPANVFNEALKALVATIN--------------------------------
9	MUSTER	1t5jA	0.112	0.820	0.696	threading_9	--LVKMRDKILGS--VFGAVIGDALGMPTEEIKKLYGFVDSYLNKGEWTDDTEQAICLIKSLT--KEGIDIKKFANCLIAWKNIGLTSLMAIDKLEDYSGVDSSSCGAAMRIYPLGIVFHNNLKKLKEEVIKASNKTAIAGALAIAF----FVSSALKDRK------DFSLLDECYNYIK-----DIDEEFAKKLLEIKNF-LDYIYDYFGTGVKTDEVVPSAIATYLLT------DNFKEGMLKCINAGGDTSLASMYGAMAGAYYNIPKEWIDGLKNKEVIFELAERLYHLATE-------------------------------
10	SPARKS	3mbp_	0.118	0.930	0.722	threading_10	AEVGKKFEKDTGIKVTV---------EHPDKLEE---KFPQVAATGDGP--DIIFWAHDRFGGYAQSGLLAE----ITPDKAFQDKLYPFTWDA-VRYNGKLIAYPIAVEALSLIDLLPNKTWEEIPALDKELKAK---GKSALMFNLQEPYFTWPLIAADGDVGVDNAGAKAGLTFLVDLIKNKHMNSIAEAAFNKGETAMTINGPWAWSSKVNYGVTFKGQPSKPFVGVLSAGINALAKEFLENYLLTDEGLE-AVNKDKPLGAVALKSYEEELDPRIAATMENAQPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRIT

Predicted Tertiary Structure


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TM-score=0.423 to 2r2vA SCOP code=h.1.3.1	TM-score=0.423 to 1j30A SCOP code=a.25.1.1	TM-score=0.423 to 1cpcB SCOP code=a.1.1.3	TM-score=0.778 to 1ialA SCOP code=a.118.1.1	TM-score=0.425 to 2q7nB SCOP code=a.26.1.1