Template-based Modeling Results for ISPF_ECOLI

Submitted Primary Sequence

>Length 159
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
CEEECCEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
221010000000133120000002021330021100000000000000000001010020013112213202032002100310333111000000000022131120022012000400203131000201122411121322000000000013346
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
1	MUSTER	2pmpA	0.478	0.987	4.517	threading_1	FRIGHGFDLHRLEPGYPLIIGGIVIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMDEAGYEIGNLDATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK--
2	SPARKS	2uzha	0.395	0.956	5.670	threading_2	PRVGLGTDVHPIEAGRPCRLLCLEFDDADGC--ASDGDVAAHALCDALLSAAGLGDLGTIFGTDRPQWRGASGADMIRHVRGLVENAGFVIGNATVQVIGNRPKVGPRREEAQQVLSELVGAP---VSVSATTTDGLGLTGRGEGLAAIATALVAAE--
3	PROSPECT2	3qhdA	0.637	0.987	4.484	threading_3	MRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR--E
4	PPA-I	2pmpA	0.478	0.987	5.839	threading_4	FRIGHGFDLHRLEPGYPLIIGGIVIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMDEAGYEIGNLDATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK--
5	HHPRED-l	3f0d_A	0.627	0.962	4.914	threading_5	FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSD----FKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE--
6	HHPRED-g	3re3_A	0.564	0.881	4.170	threading_6	FRIGHGYDVHKFTSAKQIIIGGVEIAYHL------DGDVLIHALCDAILGALGLGDIGKHF-------KNIDSKFFLAEIKK-LDKKQYSISNIDCTIIAQAPK-LPHIEK-RACLANILEIQISQINIKATTTERLGFIGREEGIATHVVCLLYR---
7	SP3	2uzha	0.395	0.956	5.614	threading_7	PRVGLGTDVHPIEAGRPCRLLCLEFDDADGC--ASDGDVAAHALCDALLSAAGLGDLGTIFGTDRPQWRGASGADMIRHVRGLVENAGFVIGNATVQVIGNRPKVGPRREEAQQVLSELVGAP---VSVSATTTDGLGLTGRGEGLAAIATALVAAE--
8	SAM-T99	3iewA	0.635	0.981	5.155	threading_8	FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR---
9	MUSTER	3iewA	0.631	0.987	4.487	threading_9	FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE--
10	SPARKS	1w55a	0.491	1.000	5.546	threading_10	IFTGNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMAVLSSVNLKYFDW

Predicted Tertiary Structure


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TM-score=0.926 to 1iv1A TM-score=0.933 to native SCOP code=d.79.5.1	TM-score=0.926 to 1iv1A TM-score=0.933 to native SCOP code=d.79.5.1	TM-score=0.905 to 1w55A TM-score=0.925 to native SCOP code=c.68.1.13	TM-score=0.927 to 1w55A TM-score=0.958 to native SCOP code=c.68.1.13	TM-score=0.926 to 1iv1A TM-score=0.933 to native SCOP code=d.79.5.1

Experimental Structure

Download 3esjA

SCOP code=c.68.1.13