Template-based Modeling Results for ISPE_ECOLI

Submitted Primary Sequence

>Length 283
MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGANLSPLHRAML
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGANLSPLHRAML
CEEEEEECEEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCCCCEEEECCCCEEEECCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHCCEEEECCCCEEEEEECCHHHHHHHHHHCHHCCEEEEECCCCCCHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGANLSPLHRAML
2202110101000000000322212110000000031111010222331201011213213333000020021003000100312122001000122012000000000000000000020140202132002001202120000021100102121210110212321000010212010210132132243123310310020112100210023203302200210141010100010000000022221022003202310200002103102113213
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGANLSPLHRAML
1	MUSTER	1oj4A	0.960	0.979	3.285	threading_1	-RTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLKTAAD-SGRLPTGSGANISIDKRLP-GGGLGGGSSNAATVLVALNHLWQCGLSDELA--EGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLHRAL-
2	SPARKS	1oj4a	0.953	0.979	6.066	threading_2	-RTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLKTAADSG-RLPTGSGANISIDKRLP-GGGLGGGSSNAATVLVALNHLWQCGLSDELA--EGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLHRAL-
3	PROSPECT2	2v2qA	0.281	0.919	4.544	threading_3	HMIKVLSPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEIYIREGVLRVET----NIGIPQEENLVYKGLREFERIT------GIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGEVLEPVETISGKITLVIPQVSSSTGRVYSSLREEHFVTPEYAEEKIQRIISGELGDIARELYPEINEVYRFVEYLGKPFVSGSGSTVYFFGGASEELKKAAKMRG--WKVVELE-----------L
4	PPA-I	1oj4A	0.953	0.979	4.262	threading_4	-RTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLKTAADSG-RLPTGSGANISIDKRLP-GGGLGGGSSNAATVLVALNHLWQCGLSDELA--EGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLHRAL-
5	HHPRED-l	2ww4_A	0.996	0.996	5.101	threading_5	MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLHRAM-
6	HHPRED-g	2ww4_A	0.996	1.000	5.008	threading_6	MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLHRAML
7	SP3	1oj4a	0.953	0.979	6.179	threading_7	-RTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLKTAADSG-RLPTGSGANISIDKRLP-GGGLGGGSSNAATVLVALNHLWQCGLSDELA--EGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLHRAL-
8	SAM-T99	1oj4A	0.953	0.979	7.396	threading_8	-RTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLKTAADSG-RLPTGSGANISIDKRLP-GGGLGGGSSNAATVLVALNHLWQCGLSDE--LAEGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLHRAL-
9	MUSTER	1uekA	0.348	0.905	2.789	threading_9	--MERLAPAKVNLGLSVRFRREDGYHELHTLFAPFSLADRLVVEPVSSG-LHFQ----GPYGRENLAYRAASLYLEAAG------QPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVD---LFALARTLGADVPFFLLGRGAEARGVGERLKPLALPPVPAVVFFPGLRVPTPLVYRAVRPEDFGPDLPVEAILEALARNSLEGPAFRLFPELKEVRGRMRALGLVLMSGSGSAFFGLAEGPDHARRAAEALRAWWAGTLGGG-----------
10	SPARKS	1ueka	0.332	0.915	5.160	threading_10	--MERLAPAKVNLGLSVRFRREDGYHELHTLFAPFSLADRLVVEPVSSG-----LHFQGPYGRENLAYRAASLYLEA------AGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVD---LFALARTLGADVPFFLLGRGAEARGVGERLKPLALPPVPAVVFFPGLRVPTPLVYRAVRPEDFGPDLPVEAILEALYWNSLEGPAFRLFPELKEVRGRMRALGLVLMSGSGSAFFGLAEGPDHARRAAEALRAWGRAWAGTLGGG--------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.986 to 1oj4A TM-score=0.971 to native SCOP code=d.14.1.5	TM-score=0.988 to 1oj4A TM-score=0.976 to native SCOP code=d.14.1.5	TM-score=0.988 to 1oj4A TM-score=0.976 to native SCOP code=d.14.1.5	TM-score=0.827 to 1oj4A TM-score=0.838 to native SCOP code=d.14.1.5	TM-score=0.988 to 1oj4A TM-score=0.976 to native SCOP code=d.14.1.5

Experimental Structure

Download 2ww4A

SCOP code=d.14.1.5