Template-based Modeling Results for ISPD_ECOLI


  Submitted Primary Sequence

>Length 236
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
CCCCCCCEEEEEECCCCCCCCCCCCCHHHEEECCEEHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCEEEEECCHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
55333110000000002122232311320020130000100020023133121000001300130010011223312012203310100110031023220000010121002330012002002213200000010422011023242001211223001112122101121012002202431220011000022021201002032310300213002001101131233345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
1MUSTER2xwlA0.3620.9363.220threading_1------ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-EDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDA-NGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAHHH-----
2SPARKS2xwla0.3620.9365.050threading_2------ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-EDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDA-NGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAHHH-----
3PROSPECT22xwlA0.3570.9364.481threading_3------ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVF-GGEDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDANGA-VLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAH-----HH
4PPA-I2xwlA0.3620.9363.558threading_4------ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-EDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAV-DANGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAHHH-----
5HHPRED-l1i52_A1.0000.9533.104threading_5----HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR-------
6HHPRED-g1w55_A0.2440.8863.700threading_6-S----EMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSSN-ITYMKK----FTKNYEFIEGGDTRAESLKKALELID-SEFVMVSDVARVLVSKNLFDRLIENLDKA-DCITPALKVADTTLFDN-------EALQREKIKLIQTPQISKTKLLKKAL----DQNLEFTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLDLPT----PSFEI
7SP32xwla0.3620.9364.993threading_7------ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-EDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAV-DANGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAHHH-----
8SAM-T991i52A1.0000.9535.303threading_8----HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR-------
9MUSTER1i52A1.0000.9533.170threading_9----HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR-------
10SPARKS3q7ua0.3200.9284.986threading_10-----GEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILG--HRAMIVAGGSNRTDTVNLALTVLSEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDA-NGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDE--YTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG-------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.888 to 1i52A
TM-score=0.908 to native
SCOP code=c.68.1.13		 TM-score=0.888 to 1i52A
TM-score=0.908 to native
SCOP code=c.68.1.13		 TM-score=0.888 to 1i52A
TM-score=0.908 to native
SCOP code=c.68.1.13		 TM-score=0.877 to 1i52A
TM-score=0.896 to native
SCOP code=c.68.1.13		 TM-score=0.892 to 1i52A
TM-score=0.912 to native
SCOP code=c.68.1.13

  Experimental Structure

Download 1i52A
SCOP code=c.68.1.13