Template-based Modeling Results for INTZ_ECOLI

Submitted Primary Sequence

>Length 402
MSKTPLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLITLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESYAKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKKERTAPEQARKLRRRIGEIFKFAVITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALERAGSVQIQTAIRLLILTALRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVFPGRFMDKPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKGIRGVYNQAAYLKQRRAMMQDYADAIDSILAGNGNPLEPE
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKTPLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLITLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESYAKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKKERTAPEQARKLRRRIGEIFKFAVITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALERAGSVQIQTAIRLLILTALRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVFPGRFMDKPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKGIRGVYNQAAYLKQRRAMMQDYADAIDSILAGNGNPLEPE
CCCCCCCHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCEEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHEECCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKTPLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLITLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESYAKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKKERTAPEQARKLRRRIGEIFKFAVITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALERAGSVQIQTAIRLLILTALRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVFPGRFMDKPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKGIRGVYNQAAYLKQRRAMMQDYADAIDSILAGNGNPLEPE
554331123003302233321200132120000001231210010001033210101012112010320131022012102321112321333321212211200220021002221222232103201100121001101422122011310120023233212310220031002002001213112312111012113233323212122210110030024222210100010000000111101202130011330000001312424321000013300300220133122210001132233110120012003401232200000010000200241131133001100112241020011001103101200210020020012222332234
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKTPLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLITLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESYAKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKKERTAPEQARKLRRRIGEIFKFAVITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALERAGSVQIQTAIRLLILTALRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVFPGRFMDKPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKGIRGVYNQAAYLKQRRAMMQDYADAIDSILAGNGNPLEPE
1	MUSTER	1z1gA	0.167	0.803	1.433	threading_1	--------------------------ERRDLNLYIRNNG--YYCYRDPRTGK--EFGLGRD----RRIAITEAIQANIELFSGHKHKP----LTARINSDNSVTLHSWLDRYEKILASRGI-KQKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATR---AAKSEVRRSRLTADEYLKIYQAAE--SSPCWLRLAELAVVTGQRVGDLCE-KWSDIVDG----YLYVEQSKTGVKIAIPTAGISKETLDKCKEILG-GETIIASTR-REPLSSGTVSRYFRAR-EGDPPTFHELRSLSARLYEKQI--SDKFAQHLLGHKSDTAQFRDDRGREWDKK-------------------------
2	SPARKS	2kj9a	0.291	0.291	2.384	threading_2	--------------------------------------------------------------------------------------------KSVQEKRNNTRAFKTVAKSWFATK-TTWSEDYQRSVWTRLETYLFPDIGNKDIAELDTGDLLVPIKKIELGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKLEHHHHHH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PROSPECT2	1p7dA	0.148	0.657	1.881	threading_3	M------------------------------------------------------------------------------------------------------TLHSWLDRYEKILASR---GIKQKTLINYMSKIKAIRRGLPDAPLTTKEIAAMLNGYDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATR---AAKSEVRRSRLTADEYLKIYQAAESSP-CWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQS----KTGVKIAIPTALHIKETLDKCKE-ILGGETIIASTR-REPLSSGTVSRYFMRAFEGDPPTFHELRSLSARLYEKQI--SDKFAQHLLGHKSDTMASQRDD---------------------RGREWDKIEIK
4	PPA-I	1z1gA	0.168	0.813	1.739	threading_4	--------------------------ERRDLNLYIRNNG--YYCYRDPRTGKEFGLG------RDRRIAITEAIQANIELFSGHKHKP----LTARINSDNSVTLHSWLDRYEKILASRGI-KQKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATR---AAKSEVRRSRLTADEYLKIYQAAE--SSPCWLRLAELAVVTGQRVGDLCE-KWSDIVDG----YLYVEQSKTGVKIAIPTAGISKETLDKCKEILGGET--IIASTRREPLSSGTVSRYFRARFEGDPPTFHELRSLSARLYEKQI--SDKFAQHLLGHKSDTAQFRDDRGREWDKIEIK----------------------
5	HHPRED-l	1z1b_A	0.169	0.826	5.007	threading_5	----------------ER------RDLPPNLYI--RN--NGYYCYRDPRTGKE--FGLGR----DRRIAITEAIQANIELFSGHKHKPLT----ARINSDNSVTLHSWLDRYEKILARGIKQKTLINYMSKIK-AIRRGLPDAPLEDITTKEIAAMLNGYDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKS---KVRRSRLTADEYLKIYQAAES-SPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDG--YLYVEQ--SKTGVKIAIPTALHMKETLDKCKE-ILGGETIIAST-RREPLSSGTVSRARKASGLSDPPTFHELRSLSAR-LYEKQ-ISDKFAQHLLGHKSDTMASQ-RDDRGREWDKIEIK--------------------
6	HHPRED-g	1z1b_A	0.175	0.823	4.147	threading_6	-------------------ERDLP----PNLYI----RNNGYYCYRDPRTGKE--FGLGRDRRIAITEAI----QANIELFSGHKHKPLTA--RIN--SDNSVTLHSWLDRYEKILSRGIKQKTLINYMSKIK-AIRRGLPDAPLEDITTKEIAAMLNGYIEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAA---KSKVRRSRLTADEYLKIYQAAESS-PCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGY--LYVEQS--KTGVLHIDALGISMKETLDKCKEILG-GETIIASTR-REPLSSGTVSRYFKASGLSFPPTFHELRSLSAR-LYEKQ-ISDKFAQHLLGHKSDTMASQ-RDDRGRE--------------------WDKIEIK
7	SP3	2kj8a	0.291	0.291	2.097	threading_7	--------------------------------------------------------------------------------------------------SSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFERGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNLEHHHHHH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SAM-T99	3ju0A	0.421	0.236	3.853	threading_8	----SLTDSKVKNAKSLEKEYKLTD--GFGMHLLVHPNGSKYWRLSYRFEKKQRLLALGVYPAVSLADARQRRDEAKKLLAAGIDPSAKKQADNKTIQEKR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	1ouqA	0.142	0.716	0.801	threading_9	------------------------------------------------------------------------------------NLPAL-----DATSDEVRKNLMDMFRDR-----QAFSEHTWKMLLSVCRSWAAWCKLNRKWFPAEPEDVRDYLLYLQARAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRGERAKQALAFERTDFDQVRSLMENSDRIRNLAFLGIAYNTLLRIAEIARIRVKDISRDGGRMLIHIGRTKTLVSTAKALSLGVTKLVERWISVSDPNNYLFCAPSATSQLSTRALEGIFEATHRYLAWSGHSARVGAARDMARAG-VSIPEIMQAGGWTNVNIVMNYIRNSETGAMVRLLED-------------------
10	SPARKS	2kj8a	0.291	0.291	2.375	threading_10	--------------------------------------------------------------------------------------------------SSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFERGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNLEHHHHHH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.786 to 1z1gA SCOP code=d.10.1.4	TM-score=0.767 to 1z1gA SCOP code=d.10.1.4	TM-score=0.443 to 1a0pA SCOP code=a.60.9.1	TM-score=0.527 to 1z1gA SCOP code=d.10.1.4	TM-score=0.761 to 1z1gA SCOP code=d.10.1.4