Template-based Modeling Results for INTS_ECOLI

Submitted Primary Sequence

>Length 385
MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE
CCCHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCCEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE
5232210320333332120112400000012213200000011322121020131120102201310210141032211223233122212001200320022124212221022003001210011012130320222101200220233212220220130001002001211213221021003213234342222221310110020023121221000001001000011210220123111133200001122242432210101330020011012125320100011333433110320012003311232220010011000100241311130011001123211020011102113111300210020023325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE
1	MUSTER	1z1gA	0.164	0.842	1.477	threading_1	------------ERRD--LPPN----LYIRNNG--YYCYRDPRTGK--EFGLGRD----RRIAITEAIQANIELFSGHKHKTARINSDNSVTLHSWLDRYEKILASRGI-KQKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDE-GKAASAKLIRSTLSDAFREAIAEGHITTNHVAATR---AAKSEVRRSRLTADEYLKIYQAAES---SPCWLRLAELAVVTGQRVGDLCE-KWSDIV-DGYLYVE---QSKTGVKIAIPTAGISKETLDKCKEILG--GETIIASTR--REPLSSGTVSRYFRAR-EGDPPTFHELRSLSARLYEKQI-SDKFAQHLLGHKSDTASQFRDDRGREWDKK----------------
2	SPARKS	2kj9a	0.237	0.306	2.345	threading_2	--------------------------------------------------------------------------------KSVQEKRNNTRAFKTVAKSWFATK-TTWSEDYQRSVWTRLETYLFPDIGNKDIAELDTGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKLEHHHHHH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PROSPECT2	1p7dA	0.155	0.688	1.900	threading_3	M------------------------------------------------------------------------------------------TLHSWLDRYEKILA---SRGIKQKTLINYMSKIKAIRRGLPDAPLTTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATR---AAKSEVRRSRLTADEYLKIYQAAESSP--CWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQS----KTGVKIAIPTALHIKETLDKCKEILG--GETIIASTRR--EPLSSGTVSRYFMRAFEGDPPTFHELRSLSARLYEK-QISDKFAQHLLGHKSDTMASQRDDRGR-------------EWDKIEIK
4	PPA-I	1z1gA	0.155	0.870	1.802	threading_4	--------------ERRDLPPN----LYIRNNG--YYCYRDPRTGKEFGLG------RDRRIAITEAIQANIELFSGHKHKTARINSDNSVTLHSWLDRYEKILASRGI-KQKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDE-GKAASAKLIRSTLSDAFREAIAEGHITTNHVAATR---AAKSEVRRSRLTADEYLKIYQAAE---SSPCWLRLAELAVVTGQRVGDLC-EKWSDIVDGYLYVEQSKTGVKIAIPTALHIDAISKETLDKCKEILGGET-IIASTRREPLSSGTVSRYFRARKASGLSDPPTFHELRSLSARLYEK-QISDKFAQHLLGHKSDTASQFRDDRGREWDKIEIK-------------
5	HHPRED-l	1z1b_A	0.160	0.862	4.972	threading_5	---------------ERDL--PPNLY--IRN--NGYYCYRDPRTGKE--FGLGR----DRRIAITEAIQANIELFSGHKHKPLTINSDNSVTLHSWLDRYEKILARGIKQKTLINYMSKIK-AIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSK---VRRSRLTADEYLKIYQAAES--SPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGY--LYVEQS--KTGVKIAIPLGISMKETLDKCKEIL--GGETIIASTRREPSGTVSRYFMRARKASGLSFPPTFHELRSLSAR-LYEKQISDKFAQHLLGHKSDTMA-SQ-RDDRGREWDKIEIK-----------
6	HHPRED-g	1z1b_A	0.172	0.862	4.068	threading_6	---------------ERRLP--PNLY--I--RNNGYYCYRDPRTGKE--FGLGRDRRIAITEAI----QANIELFSGHKHKPARINSDNSVTLHSWLDRYEKIASRGIKQKTLINYMSKIK-AIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAA---KSKVRRSRLTADEYLKIYQAAESS--PCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGY--LYVEQSKTGVKALHIDALGISMKETLDKCKEILGG--ETIIASTR--REPLSSGTVSRYFKASGLSFPPTFHELRSLSAR-LYEKQISDKFAQHLLGHKSDTMA-SQ-RDDRGREWDKIEIK-----------
7	SP3	2kkva	0.240	0.314	2.123	threading_7	------------------------------------------------------------------------------------MENSGAYTFETIAREWHESN-KRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKEVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPLEHHHHHH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SAM-T99	3ju0A	0.378	0.234	4.001	threading_8	SLTDSKVKNAKSLEKEYKLTDGFGMHLLVHPNGSKYWRLSYRFEKKQRLLALGVYPAVSLADARQRRDEAKKLLAAGIDPSAKKQADNKT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	1ouqA	0.138	0.751	0.866	threading_9	------------------------------------------------------------------------------NPVDATSDEVRKNLMDMFRDR------QAFSEHTWKMLLSVCRSWAAWCKLNRKWFPAEPEDVRDYLLYLQARGAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRGERAKQALAFERTDFDQVRSLMENSDRDIRNLAFLGIAYNTLLRIAEIARIRVKDISRDGGRMLIHIGRTKTLVSVEKALSLGVTKLVERWISVSGDPNNYLFCRAPSATSQLSTRALEGIFEATHRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTN--NIVMNYIRNSETGAMVRLLED----------
10	SPARKS	2kj8a	0.932	0.306	2.331	threading_10	--------------------------------------------------------------------------------------SSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNLEHHHHHH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.690 to 1z1gA SCOP code=d.10.1.4	TM-score=0.730 to 1z1gA SCOP code=d.10.1.4	TM-score=0.452 to 1a0pA SCOP code=a.60.9.1	TM-score=0.550 to 1z1gA SCOP code=d.10.1.4	TM-score=0.853 to 1z1gA SCOP code=d.10.1.4