Template-based Modeling Results for INTR_ECOLI

Submitted Primary Sequence

>Length 411
MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS
CCCCCCCEEEECCEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHCCCHHHCCCCCCEEEEEEEEEECCEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS
554213012121320101010302202121321422331032012112201210121112102312322202312224222000200210032322312220033012001100011042130230222002200220032322223324234422123002200100010021013111022100320432343424232023210210031032102100100010001001001011310123311010111011232223243320201010132003002301321133332322122432232333312100112112243322112210021021004402044210020000000001312120110021011310300120001003311221121023315
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS
1	MUSTER	1z1gA	0.156	0.810	1.671	threading_1	RRDLPPNLYIRNGYYCYRDPRTGKEFGLGRD--------RRIAITEAIQANIELFSG------HKHKPLTAR--INSDNSVTLHSWLDRYEKILASRGI-KQKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDEG---------------KAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVRRS-RLTADEYLKIYQAAESCWLRLAELAVVTGQRVGDLC-EKWSDIV--DGYLYVEQ----------SKTG-VKIAIPTALHILGISKETLDKCKEILG----------------------GETIIASTRREPLSSGTVSRYFRARKASFEGDPPTFHELRSLSARLYEKQI-SDKFAQHLLGHKSDTASQ-FRDDRGREWDKIEIK-------
2	PPA-I	1z1gA	0.146	0.815	2.501	threading_2	RRDLPPNLYIRNGYYCYRDPRTGKEFGLGRD--------RRIAITEAIQANIELFSGH--------KHKPLTARINSDNSVTLHSWLDRYEKILASRGI-KQKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDEG---------------KAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVRRS-RLTADEYLKIYQAAESSWLRLAELAVVTGQRVGDLC-EKWSDIVDGYLYVEQSKTGVKIAIPTALHIDA----LGISKETLDKCKEILG-----------------------------GETIIASTRREPLSSGTVSRYFRARKASFEGDPPTFHELRSLSARLYEK-QISDKFAQHLLGHKSDTASQ-FRDDRGREWDKIEIK-------
3	HHPRED-l	1z1b_A	0.175	0.822	4.697	threading_3	RRDLPPNLYIRNGYYCYRDPRTGKEFG--LGR------DRRIAITEAIQANIELFSGHKHKPL--------TARINSDNSVTLHSWLDRYEKILSRGIKQKTLINYMSKIKA-IRRGLPDAPLEDITTKEIAAMLNGYIDE--------------GKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSKVRR-SRLTADEYLKIYQAAESSPRLAMELAVVTGQRVGDLCEMKWSDIVDG--YLYVEQSKTGVKIAIP----TALHIDALGISMKETLDK---------------------CKEILGGETIIA-----STRREPLSSGTVSRYFMRARKASGLSPPTFHELRSLSAR-LYEKQISDKFAQHLLGHKSDTMA-SQ-RDDRGREWD-KIEI---K--
4	SPARKS	3nkha	0.185	0.474	3.734	threading_4	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSNAYLELNEIESIIKDIRFYLFVALTEFQALNGRIGE-LAIQNEDIDFDNKSLNINGTIHWFGGFGVKDTTSSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNR---------------NFVFTNHKGNPQ-TERFNKILREAAKDVGIKEVSSHILRHSHISLLSQQGVSLKAIDR-VGHSDHRTTLSIYSHVTEQDKDNKLEQVKLG--
5	HHPRED-g	1z1b_A	0.163	0.793	4.403	threading_5	-----PNLYIRNGYYCYRDPRTGKEFG----LG----RDRRIAITEAIQANIELFSG--------HKHKPLTARINSDNSVTLHSWLDRYEKILSRGIKQKTLINYMSKIK-AIRRGLPDAPLEDITTKEIAAMLNGYIDE--------------GKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSKVR-RSRLTADEYLKIYQAAESWLRLAMELAVVTGQRVGDLCEMKWSDIVDG--YLYVE----------QSKTGVK-IAIPTALHMKETLDKCKEI--------------------------LGGETIIASTRREPLSSGTVSRYFMRARKASGLSFPTFHELRSLSAR-LYEKQISDKFAQHLLGHKSDTMA-SQ-RDDRGREWDKIEIK------
6	PROSPECT2	1p7dA	0.151	0.659	2.664	threading_6	M--------------------------------------------------------------------------------TLHSWLDRYEKILASRIKQKTLINYMSKIK----AIRRGLPDAPLTTKEIAAMLNGYID--------------EGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVRR-SRLTADEYLKIYQAAESSLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQ------------SKTGV-KIAIPTALHIDALGISMKETLDKCKEILG-------------------GETIIASTRREPLSSGTVSRYFMRARKASGLSPPTFHELRSL-SARLYEKQISDKFAQHLLGHKSDTMASQ-RDDRGREWDKIE-------IK
7	SP3	3nkha	0.190	0.474	4.117	threading_7	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSNAYLELNEIESIIKDIHKRFYLFVAEFQALNGRIGEL-AIQNEDIDFDNKSLNINGTIHWFHGFGVKDTTSSYRTIGLSSRSCEILKKAILENKKDSKW---------------NDGYLNRNFVFTNHKGNPQ-TERFNKILREAAKDVGIKEVSSHILRHSHISLLSQQGVSLKAIDR-VGHSDHRTTLSIYSHVTEQDKDNKLEQVK--LG
8	SAM-T99	2a3vB	0.205	0.664	3.693	threading_8	---------------------------------------------------------------------------RYYAKKTIEAYLHWITRYIHHNKKHPSLMGDKEVEEF-------------LTYLAVQGKVATKT--------------QSLALNSLSF-------------LYKEILKTPLSLEIRFQRSQLERKVLTRDEIRRLLEIVDPKHQLPIKLLYGSGLRLMECMRLRVQDIDFDYGAI----------RIWQGKGGK-NRTVTLAKELYPHLKEQIALAKRYYDRDLHQKN---------YGHYLFPSFQLSDVMRRHHNETVLQKAVRRSAQEAGIKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTT-QIYTHVLDRGASGVLSPLSRL--
9	MUSTER	2a3vB	0.190	0.730	1.341	threading_9	------------------------------------------------------------------------------MGSQFLLSVREFMQTR--YYAKKTIEAYLHWITRYIH--HNKKHPSLMGDKEVEEFLTYLAV------------QGKVATKTQSLALNSLSFLYKEILKTPL---SLEIRFQRSQLERKLPVVLTRDEIRRLLEIVDPKHQLPIKLLYGSGLRLMECMRLRVQDIDFDYGAIRIWQ----------GKGGK-NRTVTLAKELYPHLKEQIALAKRYYDRPTALKEKYPNAPYEFRWHYLFLDPESDVMRRHHMNETVLQKAVRRSAQEAGIKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTD-VKTTQIYTHVLDRGASGVLSPLSRL--
10	SPARKS	2a3va	0.177	0.715	3.519	threading_10	-------------------------------------------------------------------------------GSQFLLSVREFMQT--RYYAKKTIEAYLHWITRYI-HFHNKKHPSLMGDKEVEEFLTYLA------------VQGKVATKTQSLALNSLSFLYKEILKTPLSLEIR---FQRSQLERKLPVVLTRDEIRRLLEIVDPKHQLPIKLLYGSGLRLMECMRLRVQDIDFDYGAIRIWQG-----------KGGKNRTVTLAKELYPHLKEQIALAKRYYDRDLHQKNYGGVWLPTAPSFQLSLDPESDVMRRHHMNETVLQKAVRRSAQEAGIETVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVK-TTQIYTHSGVLSPLSRL--------

Predicted Tertiary Structure


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TM-score=0.749 to 1z1gA SCOP code=d.10.1.4	TM-score=0.664 to 1z1gA SCOP code=d.10.1.4	TM-score=0.742 to 1z1gA SCOP code=d.10.1.4	TM-score=0.668 to 1z1gA SCOP code=d.10.1.4	TM-score=0.506 to 1ouqA SCOP code=a.60.9.1