Template-based Modeling Results for INTF_ECOLI

Submitted Primary Sequence

>Length 466
MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR
CCCCHHHHHHHHCCCCHHCCCCCHHCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR
5411111112101103120011023102232400231033132343322110012312000010131110000100121210202012013120320121032012103221114223223212132131213311200120032002203221223222210120012102102311323220101101100120141302301231012002223433221022002002100200010121211121111321314322322224233103331021002003312120000000000000022310020212201132100102232323210000320030022003123332333100021324224112131001200320313300000011000100331301210012001132221013012221230023002102200121122224432324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR
1	HHPRED-g	3ju0_A	0.191	0.202	3.107	threading_1	-------------------------------SLTDSKVKNAK--SLEKEYKLTDGF--GMHLLVPNGSKYWRLSYRFEKKQRLLALGVYPAVSLADARQRRDEAKKLLAAGIDPSAKKQADNKTIQ------EKR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	1jdha	0.089	0.968	1.562	threading_2	DEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARC----TAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPV---DSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDEGLLGTLVQLLGSDDICAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHW----PLIKATVGLIRNLALCPANHAPLR----EQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAIEAEGASRNEGVRMS
3	SPARKS	1a0p_	0.196	0.558	2.225	threading_3	-----------------------------------------------------------------------------------------------------------------------------------------QDLARIEQFLDALWLKNLAENTLNAYRRDLSMMVEWLHHRG--------------------LTLATAQSDDLQALLA-----ERLSSARLLSAVRRLFQYLYREKFREDDP------------------SAHLKDLSEAQVERLLQAPLIDQELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLRPWLLNGVSIDVLFPSQR--AQQMTRQTFWHRIKHYADSEKLSPHVLRHAFATHLLNHGADLRVVQMLLSDLS---TTQIYTHVATERLRQLHQ---------------------
4	MUSTER	1z1gA	0.162	0.704	1.372	threading_4	--------------------------------------ERRDLPP-------------NLYIR--NG--YYCYRDPRTGK--EFGLGRD----RRIAITEAIQANIELFSGHKHKPLTARINSD----------NSVTLHSWLDRYEKILASRGI-----------------------KQKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDEGKAASAKLIRSTLSDAFREAIAEG----HITTNHVAATR-----AAKSEVRRSRLTADEYLKIYQAAE--SSPCWLRLAELAVVTGQRVGDLCE-KWSDIV-DGYLYVEQSKTGVKIAIPTAGISKETLDKCKEIL-----GGETIIASTR--REPLSSGTVSRYFRAR-EGDPPTFHELRSLSARLYEK-QISDKFAQHLLGHKSDTASQFRDDRG----------------------REWDKIEIK
5	PROSPECT2	1p7dA	0.155	0.567	1.933	threading_5	M----------------------------------------------------------------------------------------------------------------------------------------TLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRG-------------------------LPDAPLTTKEIAAMLNGYDEGKAASAKLIRSTLSDAFREAIA---------EGHITTNHVAATRAAKSEVRRSRLTADEYLKIYQAAES-SPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQ-SKTGVKIAIPTALHIKETLDKCKEI-----LGGETIIASTR--REPLSSGTVSRYFMRAFEGDPPTFHELRSLSARLYEK-QISDKFAQHLLGHKSDTMASQRDDRGR----------------------EWDKIEIK
6	PPA-I	1z1gA	0.148	0.710	1.774	threading_6	-------------------------------------------------------ERRDLNLYIRNNG-YYCYRDPRTGKEFGLG------RDRRIAITEAIQANIELFSGHKH----------KPLTARINSDNSVTLHSWLDRYEKILASRG-----------------------IKQKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDEGKAASAKLIRSTLSDAFREAIAEG----HITTNHVAATRAAKSEVRRS-----RLTADEYLKIYQAAE--SSPCWLRLAELAVVTGQRVGDLCE-KWSDIV-DGYLYVEQSKTGVKIAIPTAGISKETLDKCKEILGGETIIAS----TRREPLSSGTVSRYFRARKASGEGDPPTFHELRSLSARLYEK-QISDKFAQHLLGHKSDTASQFRDDRGR----------------EWDKIEIK------
7	HHPRED-l	1z1b_A	0.175	0.712	5.067	threading_7	--------------------------------------ERRDLP-------------PNLYI---RNNGYYCYRDPRTGKE--FGLGR----DRRIAITEAIQANIELFSGHKHKPLTA----------RINSDNSVTLHSWLDRYEKILASGIKQKTLINYMS-----------------------KIKAIRRGLPDAPLEDITTKEIAAMLNGYIDGKAASAKLIRSTLSDAFREAIAEGHITT----NHVAATRA----AKS-KVRRSRLTADEYLKIYQAAESS-PCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVE-QSKTGVKIAIPTALHMKETLDKCKE-----ILGGETIIASTREPLSSGTVSRYFMRARKASGLSPPTFHELRSLSARL-YEKQISDKFAQHLLGHKSDTMAS-Q-RDDGREWDKIE---------------------I-
8	HHPRED-g	1z1b_A	0.154	0.710	4.089	threading_8	--------------------------------E-------------RR--DLPP----NLYI---RNNGYYCYRDPRTGK--EFGLGRDRRIAITE----AIQANIELFSGHKHKPLTARIN----------SDNSVTLHSWLDRYEKILSRGIKQKTLINYMSK----------------------I-KAIRRGLPDAPLEDITTKEIAAMLNGYIEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRA--------AK-SKVRRSRLTADEYLKIYQAAESS-PCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGY--LYVESKTGVKHIDALGISMKETLDKCKEILG-----GETIIASTR--REPLSSGTVSRYFMASGLSDPPTFHELRSLSARL-YEKQISDKFAQHLLGHKSDTMA-SQ-RDDR--GRE------------------WDKIEIK
9	SP3	1a0p_	0.192	0.558	2.099	threading_9	-----------------------------------------------------------------------------------------------------------------------------------------QDLARIEQFLDALWLENLAENTLNAYRRDLSMMVEWLHHR--------------------GLTLATAQSDDLQALLA-----ERLSSARLLSAVRRLFQYLYR----EKFREDDPS--------------AHLKDLSEAQVERLLQAPLIDQELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLRPWLLNGVSIDVLFPSQR--AQQMTRQTFWHRIKHYAVLAKLSPHVLRHAFATHLLNHGADLRVVQMLLSDL---STTQIYTHVATERLRQLHQ---------------------
10	SAM-T99	1a0pA	0.203	0.549	3.695	threading_10	----------------------------------------------------------------------------------------------------------------------------------------------IEQFLDALEKNLAENTLNAYRRDLSMMVEWLHHR---------------------GLTLATAQSDDLQALLAERLS-----SARLLSAVRRLFQYLYR----EKFREDDPSAHL--------------KDLSEAQVERLLQAPDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNIDVLFPSQAQQMTRQTFWHRIKHYAVLAGIEKLSPHVLRHAFATHLLNHGADLRVVQMLL--SDLS-TTQIYTHVATERLRQLHQ---------------------

Predicted Tertiary Structure


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TM-score=0.372 to 2jfgA SCOP code=c.5.1.1	TM-score=0.718 to 1wa5B SCOP code=a.118.1.1	TM-score=0.643 to 1a0pA SCOP code=a.60.9.1	TM-score=0.559 to 1z1gA SCOP code=d.10.1.4	TM-score=0.616 to 1z1gA SCOP code=d.10.1.4