Template-based Modeling Results for INTE_ECOLI

Submitted Primary Sequence

>Length 375
MAARPRKNNVSVPNLYPLYSRKVNKVYWRYKHPVTGKFHALGTNEAEAIAIATEANTRLAEQRTRQILAISDRIATSKGKAITTSTWLDRYQAIQDDRLKSGDIRLNTYKQKAKPVSLLRERAGMKLISAVDVRDIAQLLDEYIAAGRPRMAQVVRSVLIDVFKEAQHYGEVPPGYNPALATKQPRRKITRQRLSLEEWKKIFDIADATHRYMGNAMLLALVTGQRLGDISRMKFSDIWDDHLHVIQEKTGSKIAIPLSLRLNAINWSLRDVVARCRDYAVSAYLVHFFRSTSQAERGAQVKANTLTMNFSKARDLARIDWGEGSPATFHEQRSLSERLYKEQGLDTQKLLGHKTQQQTDRYHDDRGKGWSKVAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAARPRKNNVSVPNLYPLYSRKVNKVYWRYKHPVTGKFHALGTNEAEAIAIATEANTRLAEQRTRQILAISDRIATSKGKAITTSTWLDRYQAIQDDRLKSGDIRLNTYKQKAKPVSLLRERAGMKLISAVDVRDIAQLLDEYIAAGRPRMAQVVRSVLIDVFKEAQHYGEVPPGYNPALATKQPRRKITRQRLSLEEWKKIFDIADATHRYMGNAMLLALVTGQRLGDISRMKFSDIWDDHLHVIQEKTGSKIAIPLSLRLNAINWSLRDVVARCRDYAVSAYLVHFFRSTSQAERGAQVKANTLTMNFSKARDLARIDWGEGSPATFHEQRSLSERLYKEQGLDTQKLLGHKTQQQTDRYHDDRGKGWSKVAL
CCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCCHHHEECCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAARPRKNNVSVPNLYPLYSRKVNKVYWRYKHPVTGKFHALGTNEAEAIAIATEANTRLAEQRTRQILAISDRIATSKGKAITTSTWLDRYQAIQDDRLKSGDIRLNTYKQKAKPVSLLRERAGMKLISAVDVRDIAQLLDEYIAAGRPRMAQVVRSVLIDVFKEAQHYGEVPPGYNPALATKQPRRKITRQRLSLEEWKKIFDIADATHRYMGNAMLLALVTGQRLGDISRMKFSDIWDDHLHVIQEKTGSKIAIPLSLRLNAINWSLRDVVARCRDYAVSAYLVHFFRSTSQAERGAQVKANTLTMNFSKARDLARIDWGEGSPATFHEQRSLSERLYKEQGLDTQKLLGHKTQQQTDRYHDDRGKGWSKVAL
554334433220120001113333210010202121111110222210021012012211332233222112212323232220210022001101232332323230121103001101320132202202230012002202421332002100100120021013212022121002203324442243302231022002103312310000010000001110101302120012210011223222200000022011012102200220332122210011122223234223022310120012002203232131220101101100121033201301300103122002100222131013224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAARPRKNNVSVPNLYPLYSRKVNKVYWRYKHPVTGKFHALGTNEAEAIAIATEANTRLAEQRTRQILAISDRIATSKGKAITTSTWLDRYQAIQDDRLKSGDIRLNTYKQKAKPVSLLRERAGMKLISAVDVRDIAQLLDEYIAAGRPRMAQVVRSVLIDVFKEAQHYGEVPPGYNPALATKQPRRKITRQRLSLEEWKKIFDIADATHRYMGNAMLLALVTGQRLGDISRMKFSDIWDDHLHVIQEKTGSKIAIPLSLRLNAINWSLRDVVARCRDYAVSAYLVHFFRSTSQAERGAQVKANTLTMNFSKARDLARIDWGEGSPATFHEQRSLSERLYKEQGLDTQKLLGHKTQQQTDRYHDDRGKGWSKVAL
1	MUSTER	1z1gA	0.322	0.904	2.236	threading_1	------ERRDLPPN----LYIRNNG-YYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSD----NSVTLHSWLDRYEKILASRGIK-----QKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDE-GKAASAKLIRSTLSDAFREAIAEGHITT--NHVAATRAAKSEVRRSRLTADEYLKIYQAAESSP-CWLRLAELAVVTGQRVGDLC-EKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGIS-KETLDKCKEILGGETIIA-------STRREPLS-SGTVSRYFRARKASGLSFE-GDPPTFHELRSLSARLYEKQISDAQHLLGHKSDTASQFR-DDRGREWDKIEI
2	PPA-I	1z1gA	0.313	0.904	2.583	threading_2	------ERRDLPPN--LYIRNNG---YYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSD----NSVTLHSWLDRYEKILASRGIK-----QKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDE-GKAASAKLIRSTLSDAFREAIAEGHITT--NHVAATRAAKSEVRRSRLTADEYLKIYQAAESSP-CWLRLAELAVVTGQRVGDLC-EKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGI-SKETLDKCKEILGGETIIA-------STRREPLSSGTVSRYFRARKASG--LSFEGDPPTFHELRSLSARLYEKQISFAQHLLGHKSDTASQFRDD-RGREWDKIEI
3	HHPRED-l	1z1b_A	0.340	0.909	6.404	threading_3	--------ERDLPNLY---IRNNG--YYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLT----ARINSDNSVTLHSWLDRYEKILA----SRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAA--KSKVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEIL-------GGETIIASTRREPLSSGTVSRYFMRARKASGLSFE-GDPPTFHELRSLSAR-LYEKQISAQHLLGHKSDTMASQ-RDDRGREWDKIE-
4	SPARKS	1ae9a	0.373	0.451	2.962	threading_4	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETII-------ASTRREPLSSGTVSRYFMRARKASGLSFE-GDPPTFHELRSLSARLYEKQISFAQHLLGHFRDDRGREWDKIEI--------
5	HHPRED-g	1z1b_A	0.344	0.915	5.545	threading_5	-------ERDLPPNLYIR---NN--GYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELF----SGHKHKPLTARINSDNSVTLHSWLDRYEKILAS----RGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHIT--TNHVAATRAAKSKVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIAST-------RREPLSSGTVSRYFMRARKASGLSF-EGDPPTFHELRSLSARLY-EKQISAQHLLGHKSDTMASQ-RDDRGREWDKIEI
6	PROSPECT2	1p7dA	0.343	0.739	2.882	threading_6	M---------------------------------------------------------------------------------TLHSWLDRYEKIL----ASRGIKQKTLINYMSK---IKAIRRGLPDAPLTTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITT--NHVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIA-------STRREPLSSGTVSRYFMRARKASGLS-FEGDPPTFHELRSLSARLYEKQIKFAQHLLGHKSDTMASQRDDRGREWDKIEIK
7	SAM-T99	1z1gA	0.328	0.853	5.128	threading_7	------ERRDLPPNLY---IRNNG--YYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFS----GHKHKPLTARINSDNSVTLHSWLDRYEKILA----SRGIKQKTLINY-SKIKAIRRGLPDAPLEDITTKEIAALNGYIDEG-KAASAKLIRSTLSDAFREAIAEGHIT--TNHVAATRAAKSEVRRSRLTADEYLKIYQAA-ESSPCWLRLAELAVVTGQRVGDLCE-KWSDIVDGYLYVEQSKTGVKIAIP-TALHIDALGISKETLDKCKEILGGETIIA-------STRREPLSSGTVSRYF-RARKASGLSF-EGDPPTFHELRSLSARLYEKQISDAQHLLGHKS--------------------
8	SP3	1ae9a	0.379	0.451	3.051	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTR-------REPLSSGTVSRYFMRARKASGLSF-EGDPPTFHELRSLSARLYEKQISFAQHLLGHFRDDRGREWDK--------IEI
9	MUSTER	1ouqA	0.117	0.795	1.243	threading_9	------------------------------------------------------------------------NLPALPVDATS--EVRKNLMDMFRDR---QAFSEHTWKMLLSVCRSWAAWCKLRKWFPAEPEDVRDYLLYLQARGAVKTIQQHLGQLNMLHRRSGLPRPSDSRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDIRNLAFLGIAYNTLLRIAEIARIRVKDISRGRMLIHIGRTTAGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDRYLAWSGHSARVGAARDMARAGVSIMQAGGWTNVNIVMNYIRNLDSETGAMVR
10	SPARKS	2a3va	0.163	0.736	2.942	threading_10	---------------------------------------------------------------------------------------GSQFLLSVREFMQTRYYAKKTIEAYLHWITRYIHFHNKKHPSLMGDKEVEEFLTYLAVQGATKTQSLALNSLSFLYKEILKTPLSLEIR----FQRSQLERKLPVVLTRDEIRRLLEIVDPKH---QLPIKLLYGSGLRLMECMRLRVQDIDFGAIRIWQGKGGKNRTVTLAKELYPHLKEQIALAKRYYDRDLWHYLFPSFQLSLDPESDHHMNETVLQKAVRRSAQEAGIE----KTVTCHTLRHSFATHLLEVGATVQEQLGHTDVKTTQIYTHSGVLSPLSRL-

Predicted Tertiary Structure


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TM-score=0.827 to 1z1gA SCOP code=d.10.1.4	TM-score=0.836 to 1z1gA SCOP code=d.10.1.4	TM-score=0.814 to 1z1gA SCOP code=d.10.1.4	TM-score=0.782 to 1z1gA SCOP code=d.10.1.4	TM-score=0.495 to 1a0pA SCOP code=a.60.9.1