Template-based Modeling Results for INTD_ECOLI

Submitted Primary Sequence

>Length 387
MSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSEIMEDIKKA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSEIMEDIKKA
CCEEEECCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSEIMEDIKKA
232122232000001132232121212243241022112211211232332232231103200220023323332131022102101310211113201211011002313233033013220220022022122233321222011210000110020004213113402123133243432320333102200330231010001000000011110030213101233200001133243422000101320030023012323321122232233121211222341222012001100440203302000000000000131111021012001131020021002002210230032013102331331222211321345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSEIMEDIKKA
1	MUSTER	1z1gA	0.166	0.809	1.562	threading_1	LPLYIRNNGYYCYRDPRTGKEFGLG---RDRRIAITEAIQANIELFSGHKHKPLNSVTLHSWLDRYEKILASRGI-----------------KQKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDEG--------KAASAKLIRSTLSDAFREAIAE-GHITTNHVAATRAAKEVRRSRLTADEYLKIYQAAESCWLRLAELAVVTGQRVGDLC-EKWSDIVDG----YLYVEQSKTGVKIAIPTALHILGISKETLDKCKEILGGET-------IIASTRREPLSSGTVSRYFRARKASGLSPPTFHELRSLSARLYEK-QISDKFAQHLLGHKSDTASQFRDDRGRE--------------------------------
2	SPARKS	2a3va	0.162	0.718	3.564	threading_2	--------------------------------------------------------------------------GSQFLLSVREFMQTRYYAKKTIEAYLHWITRYIHFHNKKHPSLMGDKEVEEFLTYLA-----VQGKVATKTQSLALNSLSFLYKEILKTP--LSLEIRFQRSQLERKLPVVLTRDEIRRLLEIVDPKHQLPIKLLYGSGLRLMECMRLRVQDIDFDYGAIRI--WQGKGGKNRTVTLAKELYPHLKEQIALAKRYYDRDLHQKNYGGVWLPTRHHMNETVLQKAVRRSAQEAGIETVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQIYTHSGVLSPLSRL--------------------------
3	PROSPECT2	1p7dA	0.137	0.680	2.376	threading_3	M--------------------------------------------------------TLHSWLDRYEKILASRGKQKTLINYMSKIKAIRRGLPDAPLTTKEIAAMLNGY---------------------------IDEGKAASAKLIRSTLSDAFREAIA-EGHITTNHVAATRAAKEVRRSRLTADEYLKIYQAAPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQ----SKTGVKIAIPTALHMKETLDKCKEILGGETIIASTRREPLS----------SGTVSRYFMRARKASGLSPPTFHELRSL-SARLYEKQISDKFAQHLLGHKSDTMASQRDDRGREWDKIEIK-------------------------
4	PPA-I	1z1gA	0.161	0.835	1.947	threading_4	PNLYIRNNGYYCYRDPRTGKEFGLG---RDRRIAITEAIQANIELFSGHKHKPL----------TARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDEG--------KAASAKLIRSTLSDAFREAIAE-GHITTNHVAATRAASEVRRSRLTADEYLKIYQAAEPCWLRLAELAVVTGQRVGDLC-EKWSDIVDG----YLYVEQSKTGVKIAIPTALHSKETLDKCKEILGGE-----------TIIASTRREPLSSGTVSRYFRARKASGLSPPTFHELRSLSARLYEK-QISDKFAQHLLGHKSDTASQFRDDRGREWDKIEIK-------------------------
5	HHPRED-l	1z1b_A	0.184	0.814	5.113	threading_5	PNLYIRNGYYCYRDP-RTGKEF--GLGR-DRRIAITEAIQANIELFSGHKHKSDNSVTLHSWLDRYEKILASQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEG---------------------------KAASAKLIRSTLSDAFREAIAEG-HITTNHVAATRAKSKVRRSRLTADEYLKIYQAAPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVE----QSKTGVKIAIPTALHMKETLDKCKEIL----------GGETIIASTRREPLSSGTVSRYFMRARKASGLSPPTFHELRSLSAR-LYEKQISDKFAQHLLGHKSDTMASQ-RDDRGREWDKI-E---------IK--------------
6	HHPRED-g	1z1b_A	0.158	0.835	4.467	threading_6	LPLYIRNNGYYCYRDPRTGKEFGL--G-RDRRIAITEAIQANIELFSGHKHKSDNSVTLHSWLDRYEKILARGIKQKTLINYMSKIKA-----------------IRRGLPDAPLEDITTKEIAAMLNGYID-------EGKAASAKLIRSTLSDAFREAIA-EGHITTNHVTRAAKSKVRR-SRLTADEYLKIYQAAECWLRLAMELAVVTGQRVGDLCEMKWSDIVDG--YLYVE--QSKTGVKIAIPTALHIDALGISMKET-----LDKCKEILGGETIIASTRREPLSTVSRYFMRARKASGLSPPTFHELRSLSAR-LYEKQISDKFAQHLLGHKSDTMASQ-RDDRGREWDKIEIK------------------------
7	SP3	1a0p_	0.199	0.674	3.694	threading_7	---------------------------------------------------------QDLARIEQFLDALWLEKAENTLNAYRRDLSMMVEWLHH---------------RGLTLATAQSDDLQALLA-------------ERLSSARLLSAVRRLFQYLYR-EKFREDDPSA--------HLKDLSEAQVERLLQAPLLRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVI---GKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGV--SIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDKLSPHVLRHAFATHLLNHGADLRVVQMLLSD--LSTTQIYTHVATERLRQLHQ-------------------------
8	SAM-T99	2a3vB	0.162	0.718	4.183	threading_8	-----------------MGSQFLLS-------------------------------------VREFMQTRYAKKTIEAYLHWITRYIHFHNKKHPSLMGDKEVEEFLTYLAQ--------------------------GKVATKTQSLALNSLSFLYKEILK-------TPLFQRSQLERKLPVVLTRDEIRRLLEIVDPKHQLPIKLLYGSGLRLMECMRLRVQDIDFDYGAIRIW--QGKGGKNRTVTLAKELYPHLKEQIEFRWHYLFPSFQLSLDPESDVMRRHHMNETVLQKAVRRSAQEAGIKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQIYTHVLDRGASGVLSPLSRL--------------------
9	MUSTER	2a3vB	0.165	0.734	1.435	threading_9	------------------------------------------------------MGSQFLLSVREFMQTRYAKKTIEAYLHWITRYIHFHNKKH--------------------PSLMGDKEVEEFLTYLAV-----QGKVATKTQSLALNSLSFLYKEILKT-PLSLEIR-FQRSQLERKLPVVLTRDEIRRLLEIVDPKHQLPIKLLYGSGLRLMECMRLRVQDIDFDYGAIRIWQ--GKGGKNRTVTLAKELYPHLKEQIALAKRYYDRDLHQKNYGGLSLDPESDVMRTVLQKAVRRSAQEAGIETVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQIYTHVLDRGASGVLSPLSRL--------------------
10	SPARKS	1a0p_	0.211	0.674	3.445	threading_10	---------------------------------------------------------QDLARIEQFLDALWLEKNLA---------------ENTLNAYRRDLSMMVEWLHHRTLATAQSDDLQALLA-------------ERLSSARLLSAVRRLFQYLYR-EKFREDDPS--------AHLKDLSEAQVERLLQAPLLRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVI---GKGNKERLVPLGEEAVYWLETYLEHGRPWL--LNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDKLSPHVLRHAFATHLLNHGADLRVVQMLLSD--LSTTQIYTHVATERLRQLHQ-------------------------

Predicted Tertiary Structure


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TM-score=0.676 to 1z1gA SCOP code=d.10.1.4	TM-score=0.657 to 1z1gA SCOP code=d.10.1.4	TM-score=0.568 to 1ouqA SCOP code=a.60.9.1	TM-score=0.496 to 1z1gA SCOP code=d.10.1.4	TM-score=0.768 to 1z1gA SCOP code=d.10.1.4