Template-based Modeling Results for INTA_ECOLI

Submitted Primary Sequence

>Length 413
MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTEDYADDIWRSLERDIFPAIGDISITEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLLTITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGREFIFPSRIKPNQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKIRLVG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTEDYADDIWRSLERDIFPAIGDISITEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLLTITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGREFIFPSRIKPNQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKIRLVG
CCCCCCCCCHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTEDYADDIWRSLERDIFPAIGDISITEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLLTITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGREFIFPSRIKPNQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKIRLVG
54432431132103203343121201123000000122212000010112233121202002112010220130022013102332123322322132123021100100012002233222223101200200121001101211222021300120021023321220032002101100100221111321101100311333333222222231012002103312222001000000000012111003021320123211010113324233221000030012002102311222200001323333121130011003301222200000010000100241201330011001122333022011102103101300210020030022222212312202123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTEDYADDIWRSLERDIFPAIGDISITEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLLTITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGREFIFPSRIKPNQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKIRLVG
1	MUSTER	1z1gA	0.153	0.792	1.380	threading_1	------------------ERRD--LPPN----LYIRNNG--YYCYRD--PRTGK--EFGLGRD----RRIAITEAIQANIELFSGHKHK----PLTARINSDNSVTLHSWLDRYEKILASRGI-KQKTLINYSKIKAIRRGLPDAPLEDITTKEIAALNGYIDE-GKAASAKLIRSTLSDAFREAIAEGHITTNHVAATR---AAKSEVRRSRLTADEYLKIYQAAES---SPCWLRLAELAVVTGQRVGDLCE-KWSDIVDG----YLYVEQSKTGVKIAIPTAGISKETLDKCKEILG-GETIIASTR--REPLSSGTVSRYFRARFEGDPPTFHELRSLSARLYEKQI-SDKFAQHLLGHKSDTASQFRDDRGREWDKK-------------------------------
2	SPARKS	2kj9a	0.271	0.286	2.437	threading_2	----------------------------------------------------------------------------------------------KSVQEKRNNTRAFKTVAKSWFATKTT-WSEDYQRSVWTRLETYLFPDIGNKDIAELDTGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKLEHHHHHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PROSPECT2	1p7dA	0.140	0.642	1.882	threading_3	M--------------------------------------------------------------------------------------------------------TLHSWLDRYEKILASR---GIKQKTLINYMSKIKAIRRGLPDAPLTTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATR---AAKSEVRRSRLTADEYLKIYQAAESSP--CWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQS----KTGVKIAIPTALHIKETLDKCKE-ILGGETIIASTRR--EPLSSGTVSRYFMRAFEGDPPTFHELRSLSARLYEK-QISDKFAQHLLGHKSDTM----------------------------ASQRDDRGREWDKIEIK
4	PPA-I	1z1gA	0.135	0.806	1.590	threading_4	--------------------ERRDLPPN----LYIRNNG----YYCYRDPRTGKEFGLG------RDRRIAITEAIQANIELFSGHKHK----PLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYSKIKAIR-RGLPDAPLEDITTKEIAALNGYIDE-GKAASAKLIRSTLSDAFREAIAEGHITTNHVAATR---AAKSEVRRSRLTADEYLKIYQAAE---SSPCWLRLAELAVVTGQRVGDLCE-KWSDIVDG----YLYVEQSKTGVKIAIPTALISKETLDKCKEILGGETIIASTRREPLSSGTVSRYFRARKASGEGDPPTFHELRSLSARLYEK-QISDKFAQHLLGHKSDTASQFRDDRGREWDKIEIK----------------------------
5	HHPRED-l	1z1b_A	0.156	0.806	5.025	threading_5	-------ER----RDLP-----------PNLY--IRNNG--YY--CYRDPRTGKEF--GLGR----DRRIAITEAIQANIELFSGHKHKPLTA----RINSDNSVTLHSWLDRYEKILASGIKQKTLINYMSKI-KAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKS---KVRRSRLTADEYLKIYQAAES--SPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQ--S--KTGVKIAIPTGISMKETLDKCKEIL-GGETIIAST--RREPLSSGTVMRARKASGLSFPPTFHELRSLSAR-LYEKQISDKFAQHLLGHKSDTMA-SQ-RDDRGREWDKIEIK--------------------------
6	HHPRED-g	1z1b_A	0.150	0.806	3.996	threading_6	-------ER-----------R--DLP--PNLYI----RNNGYYCY--RDPRTGKE--FGLGRDRRIAITEAI----QANIELFSGHKHKPLTAR--I--NSDNSVTLHSWLDRYEKIASRGIKQKTLINYMSKI-KAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAK--S-KVRRSRLTADEYLKIYQAAES--SPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGY--LYVEQS--KTGVLHIDALGISMKETLDKCKEILG-GETIIASTR--REPLSSGTVSRYFKASGLSFPPTFHELRSLSAR-LYEKQISDKFAQHLLGHKSDTMA-SQ-RDDRGREWDKIEIK--------------------------
7	SP3	2kj8a	0.263	0.286	2.198	threading_7	----------------------------------------------------------------------------------------------------SSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNLEHHHHHH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SAM-T99	3ju0A	0.421	0.230	4.261	threading_8	------SLTDSKVKNAKSLEKEYKLTDGFGMHLLVHPNGSKYWRLSYR--FEKKQRLLALGVYPAVSLADARQRRDEAKKLLAAGIDPSAKKQADNKTIQEKR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	1ouqA	0.142	0.700	0.792	threading_9	--------------------------------------------------------------------------------------NLPAL-----ATSDEVRKNLMDMFRDR------QAFSEHTWKMLLSVCRSWAAWCKLNRKWFPAEPEDVRDYLLYLQARGAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRGERAKQALAFERTDFDQVRSLMENSDRDIRNLAFLGIAYNTLLRIAEIARIRVKDISRDGGRMLIHIGRTKTLVSVEKALSLGVTKLVERWISVSDPNNYLFCRAPSATSQLSTRALEGIFEATGQRYLWSGHSARVGAARDMARAGVSIPEIMQAGGWTN--NIVMNYIRNSETGAMVRLLED-------------------------
10	SPARKS	2kj8a	0.263	0.286	2.428	threading_10	----------------------------------------------------------------------------------------------------SSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNLEHHHHHH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.617 to 1z1gA SCOP code=d.10.1.4	TM-score=0.673 to 1z1gA SCOP code=d.10.1.4	TM-score=0.443 to 1a0pA SCOP code=a.60.9.1	TM-score=0.491 to 1z1gA SCOP code=d.10.1.4	TM-score=0.688 to 1z1gA SCOP code=d.10.1.4