Template-based Modeling Results for INSJ_ECOLI

Submitted Primary Sequence

>Length 173
MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMYLKKLKALAHPTKK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMYLKKLKALAHPTKK
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMYLKKLKALAHPTKK
55434222321120022013333103200220202320021001002320331222313111011201120020013331102100120202010000200310333032002223222443222223333222223224343232023102102112200211321133345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMYLKKLKALAHPTKK
1	HHPRED-l	2jrt_A	0.202	0.514	2.035	threading_1	----------------MYLK--------------------RVDGPRQVTLPDGDLPPLDTRRWVASRKAAVVKAVIHGLITEREALDRYSL-SEEEFALWRSAVAAHGEKALKVTMIQK------------------------YRQL-----HHH------------------
2	HHPRED-g	2rn7_A	0.179	0.549	2.397	threading_2	--------------------------------------------------------MTKNTRFSPEVRQRAVRMVLESQATICSIAPKIGC-TPETLRVWVRQHERDTGGD--------DGGL------T-------TAERQRLKEPERENRELRRSNDILRLASAYFAKAEF
3	SAM-T99	2jn6A	0.181	0.480	1.133	threading_3	MPTKTYSEEFKRDAVALYENS--------------------------------------------------------DGASLQQIANDLGI-NRVTLKNWIIKYGS-------------------NHNVQGTTPSAAVSEAEQIRQLKKENALQRARTR--------------
4	HHPRED-l	2jn6_A	0.149	0.543	2.034	threading_4	---------------------------------------------------------MPTKTYSEEFKRDAVALYENSGASLQQIANDLGI-NRVTLKNWIIKYGSNHNVQGTT--P------------S-----AAVSEAEQIRQLKKENALQRARTRHPAES-CLEHHHH-
5	HHPRED-g	2jn6_A	0.147	0.549	2.149	threading_5	---------------------------------------------------------MPTKTYSEEFKRDAVALYENSGASLQQIANDLGI-NRVTLKNWIIKYGSNHNVQGTTP------S-------A------AVSEAEQIRQLKKENALQRARTRHPAES-CLEHHHHH
6	HHPRED-l	2jrt_A	0.162	0.393	1.987	threading_6	PLTRRWVASRKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTMI-QKYRQLH----------HH----------------------------------------------------------------------------------------------
7	HHPRED-g	2jrt_A	0.162	0.393	1.972	threading_7	LDTRRWVASRKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTMI-QKY------RQLHH----H----------------------------------------------------------------------------------------------
8	HHPRED-l	1u78_A	0.109	0.584	1.722	threading_8	-PRGALSDTERAQLDVMKLLN-VSLHEMSRKISRSRHCIRVYLKDPVSYGTS--KRAPRRKALSVRDERNVIRAASNSCKTARDIRNELQLSSKRTILNVIKR---SG-----------------------------------------------------------------
9	HHPRED-g	2jrt_A	0.244	0.497	1.862	threading_9	----------------MYLKRVDGPR--------------------QVTLPDGL-PPLDTRRWVASRKAAVVKAVIHGLITEREALDRYSL-SEEEFALWRSAVAAHGEKALKVTMIQRQLHHH-------------------------------------------------
10	HHPRED-l	2oa4_A	0.200	0.549	1.721	threading_10	---------------MMFLRKVEG----------PR----------SVTLPDGDLPPANTRRWVASRKIAVVRGVIYGLITLAEAKQTYGL-SDEEFNSWVSALAEHGKDALKVTALKK------------------------------YRQLLEHHHH-----------HH-

Predicted Tertiary Structure


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TM-score=0.426 to 2oa4A SCOP code=a.4.12.3	TM-score=0.438 to 1gdtA SCOP code=a.4.1.2	TM-score=0.535 to 2jn6A SCOP code=a.4.1.19	TM-score=0.587 to 2jn6A SCOP code=a.4.1.19	TM-score=0.570 to 2jn6A SCOP code=a.4.1.19