Template-based Modeling Results for INSF4_ECOLI

Submitted Primary Sequence

>Length 288
MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA
CHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA
211110231242010300020040010001101223242132221232012001200331352100110021024211201130011003422020202332232224232131031002121313122110000001020330100000000001210000001222203000200210024244342000001200210021011004323020021030100010001000200111002133121131011001200200112222212021001211133225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA
1	SPARKS	1c0ma	0.215	0.566	1.583	threading_1	----------------------------------------------------------------------------------------------------------------GVNP-------RGLGPLQIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQHG-RVTSVAVQHHWATAIAVLGRPK--AIKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDRIRGFMKRIPTSKQGELLAKAMYAL-NHKERGEN--TKTPIQKHWRPTV
2	PROSPECT2	3hosA	0.137	0.913	2.021	threading_2	VRTVLIFCFHLKKTAAESHRMLVPTVKTCERWFQKEHGKPPKRYEDAELQALLDE-----DDAQTQKQLA-----EQLEVSQQAVSNRLREMGKIQKVGRWVPHENPKRKKSYVDPGQPATSTARPNRFGKKTM-LCVWWDQSGVIYYELL-----------KPGETVNAARYQQQLINALQRKRPEYRVIFLHDNAPSHTARAVRDTLETLNWEVLPHAAYSPDLA-PSDYHLFASMGHALAEQRFDSYESVKKWLDEWFAA-KDDEFYWRGIHKL-PERWEKKYFE
3	PPA-I	1c0mC1	0.212	0.556	2.612	threading_3	-----------------------------------------------------------------------------------------------------------------------GVNPRGLGPLQIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQH-GRVTSVAVQHHWATAIAVLGRPK--AIKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDRIRMKRIPTSKQGELLAKAMYALNHKERGE-----NTKTPIQKHWRPT-
4	HHPRED-g	3hot_A	0.181	0.941	3.847	threading_4	TRTVLIFCFHLKKTAAESHRMLVPTVKTCERWFQRFKGKPPKRYEDAE----LQAL-LDEDDAQTQKQLAEQLE-----VSQQAVSNRLREMGKIQKVGRWVPHELNEERRKNTCEILLSRYKRKSFLHRIVTGDEKWIFFVNKKTMLCVWWDQ-S-GVIYYELGETVNAARYQQQLIRALQRKRPE-RVIFLHDNAPSHTARAVRDTLETLNWEV-LPHAAYSPDLAPSDHLFASMGHA-LAEQRFDSYESVKKWLDEWFAA-KDDEFYWRGIHKL-PERWEKCVAS
5	HHPRED-l	1c6v_A	0.173	0.483	3.274	threading_5	-----------------------------------------------------------------------------------------------------------------------------NSDLGTWQMDCTHLE---GK-IVIVAVHVASGFIEAEVIPQE-TGRQTALFLLKLAGRWPI---THLHTDNGANFASQEVKMVAWWAGIEHTFG-----------EAMNHHLKNQIDRIRE--QANSVETIVLMAV-HCMNH-KRRGGIGDMTPAERLINMI-
6	SAM-T99	3l2rA	0.124	0.899	1.225	threading_6	LQGHYIKGYPKQYTYFLEDGKVKVSRPEGVKIIPPQSDRQKIVLQAHNLAHTGREALLKIANLYWWPNMRKDVVKQLGRCQQCLITNA-----------------SNKASGPILRPDRPQKPF-----DKFFIDYIGPLPPSQGYLYVLVVVDGMT----GFTWLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTWYDLLPVVQLALNNTYSPV-LKYTPHQLLFGIDSNTPFANQDTL--
7	SP3	1cxqa	0.226	0.476	1.444	threading_7	-----------------------------------------------------------------------------------------------------------------------GR---GLGPLQIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQHG-RVTSVAAQHHWATAIAVLGRPK--AIKTDNGSCFTSKSTREWLARWGIAHTTGIPG----QAMVERANRLLKDKIRGFMKRIPTSKQGELLAKAMYALNH----------------------
8	PROSPECT2	2au3A	0.130	0.990	1.217	threading_8	MS-SDIDELRREIDIVDVIEYLNLEKVGSNYRTNCPFHPDDSLYEDISYFEAALELAKRDLEKISKDEKVYVALDRVCDFYRESASEYVKSRGIDPKVARKFDLGYAPSKENDLLEAYLETKNLLSPTKGVYRDLVIPIKDPRGRVIGFGGRRIVEDKSPKYINSPDSRLYEAKEYIKLRLFSEGIRNVVAPLGDDAGRKAMKSAIPLLLSAGVEVYYLPEGYDPDEFIKEELRRLINSETLIKTARENLEEKTREFRYYLGFISDGVRRFALASKVPMEILLMK--I
9	SPARKS	1cxqa	0.232	0.479	1.491	threading_9	--------------------------------------------------------------------------------------------------------------------------GRGLGPLQIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQH-GRVTSVAAQHHWATAIAVLGRPK--AIKTDNGSCFTSKSTREWLARWGIAHTTGIPGQ----AMVERANRLLKDKIRDGFMKRIPTSKQGELLAKAMYALNH---------------------
10	PPA-I	3hotA	0.149	0.931	2.364	threading_10	TRTVLIFCFHLKKTHRMLVEAFGPTVKTCERWFQRVDDKEHGKPPKRYEDAELQALLDEDDAQT------QKQLAEQLEVSQQAVSNRLREMGKIQKVGRWVPHELNERQMERTCEILLSRYKRKSFLHRIVTGDEKWIFFFGKKTMLCVWWDQSGVIYYELLKPGETVYQQQLINLNRALQRKRPEHRVIFLHDNAPSHTARAVRDTLETLNWEVLPHAAYSPDLAPSDYHLFASMGHAL-AEQRFDSYESVKKWLDEWFAAK-------------DDEFYWRGIHK

Predicted Tertiary Structure


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TM-score=0.529 to 1c0mC SCOP code=b.34.7.1	TM-score=0.748 to 1c0mC SCOP code=b.34.7.1	TM-score=0.450 to 1c0mC SCOP code=b.34.7.1	TM-score=0.747 to 1c0mC SCOP code=b.34.7.1	TM-score=0.538 to 1c0mC SCOP code=b.34.7.1