Template-based Modeling Results for INSD8_ECOLI

Submitted Primary Sequence

>Length 218
MPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
45322132012003322021343222332342221411132021100000000002312200000000002210000001211222300210010002211232232110000012011000210220043110101111221020100010003101310012222320210030012003211221011102220022002112222223441234
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
1	MUSTER	1c0mC1	0.176	0.729	1.156	threading_1	---------------------------------GVNPRGLGPLQIWQTDFTLE--RMAPRSWLAVTVDTASSAIVVTQH--GRVTSVAVQHHWATAIAVLG------RPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDRIRVFMKRIPTSKQGELLAKAMYALNHKER----NTKTPIQKHWRPT------------
2	SPARKS	3s3ma	0.143	0.931	1.878	threading_2	WP--NMRKDVVKQLGRCQQCLITNASNKASGPILRPDRPQKPFDKFFIDYIGLPPSQGYL-YVLVVVDGMTGFTWLYPT-KAPSTSATVKSLNVLT--------SIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLV-GRPTKWYDLLPVVQLALNNT-YSPVLK-YTPHQLLFGIDSNTFANQDTLDL
3	PROSPECT2	3hosA	0.133	0.968	1.617	threading_3	VPEVSQQAVSNRLREMGKIQKVGRWVPHELNFFVNPKRKKSYVDPGQPATSTARPNRFGKKTMLCVWWDQSGVIYYELLKPGETVNAARYQQQLINLNRALQRKRPEYRVIFLHDNAPSHTARAVRDTLETLNWEVLPHAAYSPDLAP-SDYHLFASMGHALAEQRFDSYESVKKWLDEWFAAKDDEFYWRGIHKL-PERWEKCVASDGKYFE-----
4	PPA-I	1c0mC1	0.145	0.729	2.190	threading_4	---------------------------------GVNPRGLGPLQIWQTDFTLE-PRMAPRSWLAVTVDTASSAIVVTQH----GRVTSVAVQHHWATAIAVL----GRPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDRIRVRIPTSKQGELLAKAMYALNHKERGE-----NTKTPIQKHWRPT------------
5	HHPRED-l	1c6v_A	0.155	0.679	4.063	threading_5	---------------------------------------NSDLGTWQMDCTHL---EG--KIVIVAVHVASGFIEAEVIPQ--ETGRQTALFLLKLA------GRWPIT-HLHTDNGANFASQEVKMVAWWAGIEHTFG-----------EAMNHHLKNQIDRI--REQANSVETIVLMAVHCMNH-KRRGGIGDMTPAERLINMITTEQEIQFQ---
6	HHPRED-g	1cxq_A	0.146	0.628	3.286	threading_6	------------------------------------GRGLGPLQIWQTDFTLEPRMAPRSW-LAVTVDTASSAIVVTQH-GRVTSVAAQHHWATAIAVL-------GRPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPG----QAMVERANRLLKDKIRVDGFMKRTSKQGELLAKAMYALNH--------------------------------
7	SP3	1cxqa	0.161	0.628	1.582	threading_7	------------------------------------GRGLGPLQIWQTDFTLEP-RMAPRSWLAVTVDTASSAIVVTQHG-RVTSVAAQHHWATAIAVL-------GRPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPG----QAMVERANRLLKDKIRVFMKRIPTSKQGELLAKAMYALNH--------------------------------
8	SAM-T99	1c0mC1	0.149	0.523	2.831	threading_8	------------------------------------PRGLGPLQIWQTDFTLEPRMAP-RSWLAVTVDTASSAIVVTQHGRVT-SVAVQHHWATAIAVL-------GRPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKD-----------------------------------------------------------
9	MUSTER	1bcmA1	0.163	0.789	1.056	threading_9	------------------------------------VEHLDAMQWINGDGYLVRWFNGDVIKTWFWQDVKTRKILGWRCDVSEN-----IDSIRLSFMDVVTRYGIPEDFHITIDNTRGAANKWPKGLFLLMGAKMHWTSVVAGKGWGPVERAFGVG-EEYVDKHALADAELFLKTLAEGVAMFNARGRETEMGKLSFDDVFEREYARTIVRKP----
10	SPARKS	3oy9a	0.143	0.931	1.839	threading_10	WP--NMRKDVVKQLGRCQQCLITNASNKASGPILRPDRPQKPFDKFFIDYIGLPPSQGYL-YVLVVVDGMTGFTWLYPT-KAPSTSATVKSLNVLT--------SIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLV-GRPTKWYDLLPVVQLALNNT-YSPVLK-YTPHQLLFGIDSNTFANQDTLDL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.840 to 1c0mC SCOP code=b.34.7.1	TM-score=0.839 to 1c0mC SCOP code=b.34.7.1	TM-score=0.746 to 1c0mC SCOP code=b.34.7.1	TM-score=0.505 to 1c0mC SCOP code=b.34.7.1	TM-score=0.823 to 1c0mC SCOP code=b.34.7.1