Template-based Modeling Results for HYPE_ECOLI

Submitted Primary Sequence

>Length 336
MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARAAGIAIVTGDTKVVQRGAVDKLFINTAGMGAIPANIHWGAQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIELSEAALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARAAGIAIVTGDTKVVQRGAVDKLFINTAGMGAIPANIHWGAQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIELSEAALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC
CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEECCCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHCCCHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCCCCEEECCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARAAGIAIVTGDTKVVQRGAVDKLFINTAGMGAIPANIHWGAQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIELSEAALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC
331010021211300110011001300322212323100101101011322200000110011111010110011000000000001102010000000034202230021002100200430101001010221331212200000000010223221113202200100000100000000002233221323002101112300300231210100100121000100120032010101012220203320210031111100201330100000133003200200231321220000000134410101122122110321322212412
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARAAGIAIVTGDTKVVQRGAVDKLFINTAGMGAIPANIHWGAQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIELSEAALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC
1	MUSTER	2rb9D	0.978	0.961	3.284	threading_1	-------------SMQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPTNIHWGAQTLTAGDILLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC
2	SPARKS	2i6ra	0.956	0.940	5.596	threading_2	-------------SMQQLINSLFMEAFANPWLAQEDQAR-LDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPTNIHWGAQTLTAGDILLVSGTLGDHGATILNLREQLG---ELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDL---PPLPRIC
3	PROSPECT2	2z1tA	0.478	0.929	4.862	threading_3	IS------------------DLFLRHFDNPILGTLNDAARLDL------TGPLAMSTDSYTVDPIFFPGGDIGTLAVHGTVNDVSMLGARPRYLSCGFILEEGLDMDILERVVASMGKAAREAGVFIVTGDTKVVPRGACDKMFINTTGIGEILVDPAPSGDRARPGDAILISGSMGDHGLTILSQRQGLNFAADVCSDSASLNRVVKLVLEVGDIHVLRDPTRGGLATTLNEIAGQSQAVCHVLETAVPVRESVRNGCSFLGLDPLYLANEGKLICILPEERAEAALAVLREGPHGEHAARIGSVKSVGEVVMETALGGHRLLSMLEGEQLPRIC
4	PPA-I	2rb9D	0.978	0.961	5.140	threading_4	-------------SMQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPTNIHWGAQTLTAGDILLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC
5	HHPRED-l	2z1e_A	0.400	0.863	4.303	threading_5	----------------------------G-----LDDGATIPFG-----DKHIVFTIDGHTVKPLFFPGGDIGRLAVSGTVNDLAVMGAEPIALANSMIIGEGLDMEVLKRVLKSMDETAREVPVPIVTGDTKVVED--KIEMFVITAGIGIAEHPV--SDAGAKVGDAVLVSGTIGDHGIALMSHREGIAFETELKSDVAPIWDVVKAVAEGWNIHAMKDPTRAGLSNALNEIARKSNVGILVREADIPIRPEVRAASEMLGISPYDVANEGKVVMVVAREYAEEALEAMRKTEKGRNAAIIGEVIADYKVLLETGIGGKRFMEPPEGDPV----
6	HHPRED-g	2z1u_A	0.485	0.970	3.852	threading_6	--TLLLDYGSGGRASHRLISDLFLRHFDNPILGTLNDAARLDLT-----G-PLAMSTDSYTVDPIFFPGGDIGTLAVHGTVNDVSMLGARPRYLSCGFILEEGLDMDILERVVASMGKAAREAGVFIVTGDTKVVPRGACDKMFINTTGIGEILVDPAPSGDRARPGDAILISGSMGDHGLTILSQRQGLNFAADVCSDSASLNRVVEKLVLEGDIHVLRDPTRGGLATTLNEIAGQSQAVCHVLETAVPVRESVRNGCSFLGLDPLYLANEGKLICILPEERAEAALAVLREGPHGEHAARIGSVKSAGQVVMETALGGHRLLSMLE--QLPRIC
7	SP3	2i6ra	0.956	0.940	5.772	threading_7	-------------SMQQLINSLFMEAFANPWLAQEDQAR-LDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPTNIHWGAQTLTAGDILLVSGTLGDHGATILNLREQLG---ELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDL---PPLPRIC
8	SAM-T99	2rb9D	0.981	0.958	4.874	threading_8	--------------MQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPTNIHWGAQTLTAGDILLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC
9	MUSTER	2z1uA	0.485	0.970	3.078	threading_9	--TLLLDYGSGGRASHRLISDLFLRHFDNPILGTLNDAARLDL------TGPLAMSTDSYTVDPIFFPGGDIGTLAVHGTVNDVSMLGARPRYLSCGFILEEGLDMDILERVVASMGKAAREAGVFIVTGDTKVVPRGACDKMFINTTGIGEILVDPAPSGDRARPGDAILISGSMGDHGLTILSQRQGLNFAADVCSDSASLNRVVEKLVLEGDIHVLRDPTRGGLATTLNEIAGQSQAVCHVLETAVPVRESVRNGCSFLGLDPLYLANEGKLICILPEERAEAALAVLREGPHGEHAARIGSVKSVGEVVMETALGGHRLLSML--EQLPRIC
10	SPARKS	2z1ta	0.484	0.929	5.509	threading_10	------------------ISDLFLRHFDNPILGTLNDAARLDL------TGPLAMSTDSYTVDPIFFPGGDIGTLAVHGTVNDVSMLGARPRYLSCGFILEEGLDMDILERVVASMGKAAREAGVFIVTGDTKVVPRGACDKMFINTTGIGEILVDPAPSGDRARPGDAILISGSMGDHGLTILSQRQGLNFAADVCSDSASLNRVVEKLVEVGDIHVLRDPTRGGLATTLNEIAGQSQAVCHVLETAVPVRESVRNGCSFLGLDPLYLANEGKLICILPEERAEAALAVLREGPHGEHAARIGSVKSVGQVVMETALGGHRLLSMLEGEQLPRIC

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.851 to 2z1fA TM-score=0.990 to native SCOP code=d.79.4.1	TM-score=0.851 to 2z1fA TM-score=0.990 to native SCOP code=d.79.4.1	TM-score=0.849 to 2z1fA TM-score=0.983 to native SCOP code=d.79.4.1	TM-score=0.859 to 2z1fA TM-score=0.929 to native SCOP code=d.79.4.1	TM-score=0.851 to 2z1fA TM-score=0.990 to native SCOP code=d.79.4.1

Experimental Structure

Download 2i6rC

SCOP code=d.79.4.1