Template-based Modeling Results for HYPD_ECOLI

Submitted Primary Sequence

>Length 373
MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLVQQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLVQQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCHHHHCCCCCEEEECCCCCEEECCHHHHHHHHHHHCCCCEEEEECCCCEECCCCCCCHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEECCEEEEEECCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLVQQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA
5422333312300120031022102202222332010010010121000200033001320100100101000012110110020023220000000100101123100110323312000000001002004423322000000112111110010012032351310100000100110020003123120100000000000000200120022042000001021100020001002122332020112122002322122002001100102110202000203100020131023010312031223322323303001001132313202111320113011001100020000001213233344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLVQQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA
1	MUSTER	2z1dB	0.382	0.962	3.781	threading_1	---FEAYRSREVAMKLVEKIREEAKTL----DGEIRIMH--GTHEDTVTRHGIRSLLPENVKVVSGPGCPVCITPVEDIVAMQLIMRKEEIILTTFGDMYKIPTPMGSFADLKSEGFDVRIVYGIFDTYRIAKENPDKTVVHFSPGFETTTAPAAGMLNVAAQEELENFKIYSVHRLTPPAVEVLLKQG-TVFQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAGFEPNDVLMAILMLIRMYKEGEARIINEYERAVKYEGNVVAQKMIDKFFEVV-DAKWRALGVFPKSGLELRKEWKDFEIRSFYKVEVPKPDLEKGCRCGAVLRGLALPTDCPLFGKTCTPRHPVGPCMVSYEGTCQIFYKYGVLF---
2	SPARKS	2z1da	0.383	0.960	9.890	threading_2	-----AYRSREVAMKLVEKIREEAKTL----DGEIRIMH-VGTHEDTVTRHGIRSLLPENVKVVSGPGCPVCITPVEDIVAMQLIMRKEEIILTTFGDMYKIPTPMGSFADLKSEGFDVRIVYGIFDTYRIAKENPDKTVVHFSPGFETTTAPAAGMLNVAAQEELENFKIYSVHRLTPPAVEVLLKQGT-VFQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAGFEPNDVLMAILMLIRMYKEGEARIINEYERAVKYEGNVVAQKMIDKFFEVV-DAKWRALGVFPKSGLELRKEWKDFEIRSFYKVEVPKPDLEKGCRCGAVLRGLALPTDCPLFGKTCTPRHPVGPCMVSYEGTCQIFYKYGVLF---
3	PROSPECT2	2z1dA	0.383	0.960	5.734	threading_3	-----AYRSREVAMKLVEKIREEA----KTLDGEIRIMH-VGTHEDTVTRHGIRSLLPENVKVVSGPGCPVCITPVEDIVAMQLIMEGEEIILTTFGDMYKIPTPMGSFADLKSEGFDVRIVYGIFDTYRIAKENPDKTVVHFSPGFETTTAPAAGMLNVAAQEELENFKIYSVHRLTPPAVEVLLKQGT-VFQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAGFEPNDVLMAILMLIRMYKEGEARIINEYERAVKYEGNVVAQKMIDKFFEVV-DAKWRALGVFPKSGLELRKEWKDFEIRSFYKVEVPKPDLEKGCRCGAVLRGLALPTDCPLFGKTCTPRHPVGPCMVSYEGTCQIFYKYGVL---F
4	PPA-I	2z1dB	0.381	0.965	11.778	threading_4	---FEAYRSREVAMKLVEKIREEAKT----LDGEIRIMHV-GTHEDTVTRHGIRSLLPENVKVVSGPGCPVCITPVEDIVAMQLIMRGEEIILTTFGDMYKIPTPMGSFADLKSEGFDVRIVYGIFDTYRIAKENPDKTVVHFSPGFETTTAPAAGMLNVAAQEELENFKIYSVHRLTPPAVEVLLKQGTV-FQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAGFEPNDVLMAILMLIRMYKEGEARIINEYERAVKYEGNVVAQKMIDKFFEVV-DAKWRALGVFPKSGLELRKEWKDFEIRSFYKVPKNLPDLEKGCRCGAVLRGLALPTDCPLFGKTCTPRHPVGPCMVSYEGTCQIFYKYGVLF---
5	HHPRED-l	2z1d_A	0.383	0.960	6.166	threading_5	-----AYRSREVAMKLVEKIREEAKT----LDGEIRIMHV-GTHEDTVTRHGIRSLLPENVKVVSGPGCPVCITPVEDIVAMQLIMREEEIILTTFGDMYKIPTPMGSFADLKSEGFDVRIVYGIFDTYRIAKENPDKTVVHFSPGFETTTAPAAGMLNVAAQEELENFKIYSVHRLTPPAVEVLLKQGT-VFQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAGFEPNDVLMAILMLIRMYKEGEARIINEYERAVKYEGNVVAQKMIDKFFEV-VDAKWRALGVFPKSGLELRKEWKDFEIRSFYKVEVPLPDLEKGCRCGAVLRGLALPTDCPLFGKTCTPRHPVGPCMVSYEGTCQIFYKYGVLF---
6	HHPRED-g	2z1d_A	0.383	0.960	5.264	threading_6	-----AYRSREVAMKLVEKIREEAKT----LDGEIRIMHV-GTHEDTVTRHGIRSLLPENVKVVSGPGCPVCITPVEDIVAMQLIMREEEIILTTFGDMYKIPTPMGSFADLKSEGFDVRIVYGIFDTYRIAKENPDKTVVHFSPGFETTTAPAAGMLNVAAQEELENFKIYSVHRLTPPAVEVLLKQGT-VFQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAGFEPNDVLMAILMLIRMYKEGEARIINEYERAVKYEGNVVAQKMIDKFFEVV-DAKWRALGVFPKSGLELRKEWKDFEIRSFYKVEVPLPDLEKGCRCGAVLRGLALPTDCPLFGKTCTPRHPVGPCMVSYEGTCQIFYKYGVLF---
7	SP3	2z1da	0.383	0.960	2.007	threading_7	-----AYRSREVAMKLVEKIREEAKTL----DGEIRIMH-VGTHEDTVTRHGIRSLLPENVKVVSGPGCPVCITPVEDIVAMQLIMRGEEIILTTFGDMYKIPTPMGSFADLKSEGFDVRIVYGIFDTYRIAKENPDKTVVHFSPGFETTTAPAAGMLNVAAQEELENFKIYSVHRLTPPAVEVLLKQGTV-FQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAGFEPNDVLMAILMLIRMYKEGEARIINEYERAVKYEGNVVAQKMIDKFFEVV-DAKWRALGVFPKSGLELRKEWKDFEIRSFYKVPKNLPDLEKGCRCGAVLRGLALPTDCPLFGKTCTPRHPVGPCMVSYEGTCQIFYKYGVLF---
8	SAM-T99	2z1dB	0.383	0.965	11.594	threading_8	---FEAYRSREVAMKLVEKIREEAKTL----DGEIRIMHV-GTHEDTVTRHGIRSLLPENVKVVSGPGCPVCITPVEDIVAMQLIMRKEEIILTTFGDMYKIPTPMGSFADLKSEGFDVRIVYGIFDTYRIAKENPDKTVVHFSPGFETTTAPAAGMLNVAAQEELENFKIYSVHRLTPPAVEVLLKQG-TVFQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAGFEPNDVLMAILMLIRMYKEGEARIINEYERAVKYEGNVVAQKMIDKFFEV-VDAKWRALGVFPKSGLELRKEWKDFEIRSFYKVPKNLPDLEKGCRCGAVLRGLALPTDCPLFGKTCTPRHPVGPCMVSYEGTCQIFYKYGVLF---
9	MUSTER	3c1oA	0.100	0.804	0.610	threading_9	MEKI------YIGKFMVRASLSF---------HPTFIYAPLTPDSTPSSVQLREEFRSMGVTIIEG------MEEHEKMVSVLK-----DIVISALPFP-MISSQIHIINAIKAAGNIKRFLPSDFGC------EEDR--IKPLPPFESVLEKKRIIRRAIEAAALP-YTYVSANCFGAYFVNYLLHPSPHPN-----RNDDIVIYGTG---------ETKFVL--NYEEDIAKYTIKVACD-PRCCNRIVIYRP-----PKNIISQNELISLWEAKSGLSFK---KVHMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDLMS----YEMRKDD--IEASNLYPELEF----TSIDGLLDLFIS--RAPPPT
10	SPARKS	7odca	0.153	0.842	0.861	threading_10	I-LDEGFTAKDILDQKLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVST-LAAI-----------GTGFDCASKTEIQLVQGLGVPAERVIYANPCK-----QVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLIATKFGATLKTSRLLLERAKELNID-VIGVSFHVTDPDTFVQAVSD-------------------ARCVFDMATEVGFSLDIGGLKFEEITSVINPALDKYFPSDSGV-----RIIAEPGRYYVASLAVNIITVWEQTFMYYVNDGVYGSFNC----ILYDHAHVKALLQKRPKPDE------------KYYSSSIWGPTCDPEMHVGDWMFENMGAVAAASTFNGFQRPN

Predicted Tertiary Structure


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TM-score=0.450 to 1b73A SCOP code=c.78.2.1	TM-score=0.448 to 1b73A SCOP code=c.78.2.1	TM-score=0.447 to 1b73A SCOP code=c.78.2.1	TM-score=0.451 to 1b73A SCOP code=c.78.2.1	TM-score=0.448 to 1b73A SCOP code=c.78.2.1