Template-based Modeling Results for HYFF_ECOLI

Submitted Primary Sequence

>Length 526
MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHCCCCHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHCCCHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER
4411100000000000000001002322200010000000000000000000001100221200000000101000000000000000000000001222221113212110000000000000000000001000000000100000000000000211001000110000000100000000000000001202110100011003211212110000000000000001002020000011031301000000000000000000001000001211213100100100000000000001001300110001000220000001000101100000000000000010000000000013002200231110131000000000000000010010110000000000000100000000000000000000000000001233232223121021000000000000000000012100301121000002121211010000220011011212333234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER
1	MUSTER	3rkoL	0.253	0.952	3.055	threading_1	MN---MLALTIILPLIGFVLLAFSGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGY--------SRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHF-----ADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADA-MAGPTPVSALIHAATMVTAGVYLIARTHGLFLM--TPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTHSL-PLIVLLILSTFVGALIVPPLQGV--PQTTELAHGSLEITSGVVAVVGILLARTLVTSIANSAP
2	SPARKS	3rkol	0.250	0.952	11.004	threading_2	---MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFAWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEG--------YSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAH-----FADGNNMLMWATLMLLGGAVGKSAQLPLQTWLAD-AMAGPTPVSALIHATMVTAGVYLIARTHGLFL---MTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG-VTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELGSMLTLEITSGVVAVVGILLAAWL-WLGKRTLV
3	PROSPECT2	3rkoL	0.252	0.945	5.051	threading_3	MN---MLALTIILPLIGFVLLAFS--RGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEG--------YSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAH-----FADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADA-MAGPTPVSALIHAATMVTAGVYLIARTHGLFLM--TPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQA---WDAAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVT-HSLPLIVLLILSTFVGALIVPPLQGVLPQT----TELAHGSMLTLEILWLGKRTLVTSIANSAPGR
4	PPA-I	3rkoL	0.245	0.956	7.105	threading_4	---MNMLALTIILPLIGFVLLAFRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEG--------YSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHF-----ADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADA-MAGPTPVSALIHAATMVTAGVYLIARTHGLFLM--TPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG-VTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELAHGLTLEITSGVVAVVGILLAAWLWLGKRTLVT
5	HHPRED-l	3rko_L	0.256	0.935	8.973	threading_5	---MNMLALTIILPLIGFVLLAFSRGRSENVSAIVGVGSLAALVTAFIGVDFFANGTYQSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEG--------YSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELA-----PAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADA-MAGPTPVSALIHATMVTAGVYLIARTHGLFL---MTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAW---DAAIFHLMTHAFFKALLFLASGSVILAHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIH-AHAVKGVTHSLPLIVLLILSTFVGALIVPPLQG--------VLPQTELAHGMLWLWLG-KRTLVTSIANSAPN-
6	HHPRED-g	3rko_L	0.253	0.941	8.942	threading_6	MN---MLALTIILPLIGFVLL--AFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGD-FNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSR--------FFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFA-----DGNNMLMWATLMLLGGAVGKSAQLPLQTWLADA-MAGPTPVSALIHAATMVTAGVYLIARTHGLFLM--TPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIH-AHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLP-QTTELMLTLEITSGVVA----VVGILLAAWLWLGKRS
7	SP3	3rkol	0.253	0.952	10.154	threading_7	MN---MLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFAWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEG--------YSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAH-----FADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADA-MAGPTPVSALIHATMVTAGVYLIARTHGLFL---MTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTH-SLPLIVLLILSTFVGALIVPPLQGVLPQTTELGSMLTLEITSGVVAVVGILLAAWL-WLGKRTLV
8	SAM-T99	3rkoL	0.243	0.892	8.701	threading_8	------VLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQTYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGE--------EGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHF-----ADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAM-AGPTPVSALIHATMVTAGVYLIARTHGLFLMTP---EVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILCHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVK-GVTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELAHG------------------------------
9	MUSTER	3rkoM	0.211	0.909	1.889	threading_9	----MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQLTQSAGIPQ-FGISIHLAIDGLSLLMVVLTGLLGVLAVLCS-W-----KEIEK----YQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFN-YEELLNTPMSS---GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA-SAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV-VPVITVISTFGLVFASVYSLAMLHRAYFGSQIASQELPGMSLRELFMILLLVVLLVLLG------FYPQPILDTSHS-----AIGNIQ-----FVNSV-----------
10	SPARKS	3rkom	0.222	0.916	4.067	threading_10	----MLLPWLILIPFIGGFLCWQTERF-GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSRFGISIHLAIDGLSLLMVVLTGLLGVLAVL----------CSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTF----NYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSPLFPNASA--EFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV-VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPG--MSLRELFMILLLVVLLVL-------------LGFYPQPILDTSHSAIGNIQ-QWFVNSV------

Predicted Tertiary Structure


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TM-score=0.456 to 1dlcA SCOP code=b.18.1.3	TM-score=0.441 to 1o5hA SCOP code=a.191.1.1	TM-score=0.451 to 1dlcA SCOP code=b.18.1.3	TM-score=0.442 to 1o5hA SCOP code=a.191.1.1	TM-score=0.455 to 1dlcA SCOP code=b.18.1.3