Template-based Modeling Results for HYFD_ECOLI

Submitted Primary Sequence

>Length 479
MENLALTTLLLPFIGALVVSFSPQRRAAEWGVLFAALTTLCMLSLISAFYQADKVAVTLTLVNVGDVALFGLVIDRVSTLILFVVVFLGLLVTIYSTGYLTDKNREHPHNGTNRYYAFLLVFIGAMAGLVLSSTLLGQLLFFEITGGCSWALISYYQSDKAQRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAMSELHGDARYLVYGGILFAAWGKSAQLPMQAWLPDAMEAPTPISAYLHAASMVKVGVYIFARAIIDGGNIPHVIGGVGMVMALVTILYGFLMYLPQQDMKRLLAWSTITQLGWMFFGLSLSIFGSRLALEGSIAYIVNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTLPLPGVGFCVAALAITGVPPFNGFFSKFPLFAAGFALSVEYWILLPAMILLMIESVASFAWFIRWFGRVVPGKPSEAVADAAPLPGSMRLVLIVLIVMSLISSVIAATWLQ
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MENLALTTLLLPFIGALVVSFSPQRRAAEWGVLFAALTTLCMLSLISAFYQADKVAVTLTLVNVGDVALFGLVIDRVSTLILFVVVFLGLLVTIYSTGYLTDKNREHPHNGTNRYYAFLLVFIGAMAGLVLSSTLLGQLLFFEITGGCSWALISYYQSDKAQRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAMSELHGDARYLVYGGILFAAWGKSAQLPMQAWLPDAMEAPTPISAYLHAASMVKVGVYIFARAIIDGGNIPHVIGGVGMVMALVTILYGFLMYLPQQDMKRLLAWSTITQLGWMFFGLSLSIFGSRLALEGSIAYIVNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTLPLPGVGFCVAALAITGVPPFNGFFSKFPLFAAGFALSVEYWILLPAMILLMIESVASFAWFIRWFGRVVPGKPSEAVADAAPLPGSMRLVLIVLIVMSLISSVIAATWLQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MENLALTTLLLPFIGALVVSFSPQRRAAEWGVLFAALTTLCMLSLISAFYQADKVAVTLTLVNVGDVALFGLVIDRVSTLILFVVVFLGLLVTIYSTGYLTDKNREHPHNGTNRYYAFLLVFIGAMAGLVLSSTLLGQLLFFEITGGCSWALISYYQSDKAQRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAMSELHGDARYLVYGGILFAAWGKSAQLPMQAWLPDAMEAPTPISAYLHAASMVKVGVYIFARAIIDGGNIPHVIGGVGMVMALVTILYGFLMYLPQQDMKRLLAWSTITQLGWMFFGLSLSIFGSRLALEGSIAYIVNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTLPLPGVGFCVAALAITGVPPFNGFFSKFPLFAAGFALSVEYWILLPAMILLMIESVASFAWFIRWFGRVVPGKPSEAVADAAPLPGSMRLVLIVLIVMSLISSVIAATWLQ
44120000000000000011112344221100000000000000000001202200000000000101000000010000000000000000000000112233332122101100000000000000000011100000101000000000000001230010001000001000000000000000100010011002022202000000000011020020101100020121100000000000001000000010010021123000000000100000000001001200220001000110000000000121113201100000000000010000000000000001200241210131010000000000000010110201001100000001101200000000000001000000000000010021312311221121110001000000000000100222324
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MENLALTTLLLPFIGALVVSFSPQRRAAEWGVLFAALTTLCMLSLISAFYQADKVAVTLTLVNVGDVALFGLVIDRVSTLILFVVVFLGLLVTIYSTGYLTDKNREHPHNGTNRYYAFLLVFIGAMAGLVLSSTLLGQLLFFEITGGCSWALISYYQSDKAQRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAMSELHGDARYLVYGGILFAAWGKSAQLPMQAWLPDAMEAPTPISAYLHAASMVKVGVYIFARAIIDGGNIPHVIGGVGMVMALVTILYGFLMYLPQQDMKRLLAWSTITQLGWMFFGLSLSIFGSRLALEGSIAYIVNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTLPLPGVGFCVAALAITGVPPFNGFFSKFPLFAAGFALSVEYWILLPAMILLMIESVASFAWFIRWFGRVVPGKPSEAVADAAPLPGSMRLVLIVLIVMSLISSVIAATWLQ
1	MUSTER	3rkoL	0.314	0.956	2.179	threading_1	-MNMLALTIILPLIGFVLLAFSRGSENVSAIVGVGSVGLAALVTAFIGVDFEQTSQPLWTWMSVGDFNGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYM------RGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT-PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGV---QA---WDAAIFHLMTHAFFKALLFLASGSVILACHHQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVAGFFSKDEILAGAMANG-HINLMVAGLVGAFMTSLYTFRMIFIVFH----GKEQIHA--HAVKGVTHSLPLIVLLILSTFVGALIVPPLQ
2	SPARKS	3rkol	0.317	0.956	9.188	threading_2	-MNMLALTIILPLIGFVLLAFSRGSENVSAIVGVGSVGLAALVTAFIGVDFFANSQPLWTWMSVGDFNIFNLVLDGLSLTMLSVVTGVGFLIHMYASWYM------RGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELANNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT-PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ------AWDAAIFHLMTHAFFKALLFLASGSVILACHHQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTGFFSKDEILAGAMANG-HINLMVAGLVGAFMTSLYTFRMIFIVFH----GKEQIHA--HAVKGVTHSLPLIVLLILSTFVGALIVPPLQ
3	PROSPECT2	3rkoL	0.323	0.956	5.093	threading_3	MN-MLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGEQTYSQPLWTWMSVGDFNIFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEE------GYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIV-GAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAW------DAAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVAGFFSKDEILAGAMANGHIN-----LMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVK--GVTHSLPLIVLLILSTFVGALIVPPLQ
4	PPA-I	3rkoL	0.321	0.956	4.762	threading_4	-MNMLALTIILPLIGFVLLAFSRGRWSEGVGSVGLAALVTAFIGVDFFANGEQTSQPLWTWMSVGDFNIFNLVLDGLSLTMLSVVTGVGFLIHMYASWYM------RGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELANNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT-PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ------AWDAAIFHLMTHAFFKALLFLASGSVILACHHQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTGFFSKDEILAGAMANG-HINLMVAGLVGAFMTSLYTFRMIFIVFH----GKEQIHA--HAVKGVTHSLPLIVLLILSTFVGALIVPPLQ
5	HHPRED-l	3rko_L	0.319	0.954	8.886	threading_5	-MNMLALTIILPLIGFVLLAFSRGRWSENVGVGSVGLAALVTAFIGVDFFANGEQTYLWTWMSVGDFIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGE------EGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELANNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT-PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ------AWDAAIFHLMTHAFFKALLFLASGSVILAHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLTAGFFSKDEILAGAMANGH-INLM----VAGLVGAFMTSLYTFRMIFIVFHGKEQIH--AHAVKGVTHSLPLIVLLILSTFVGALIVPPL-
6	HHPRED-g	3rko_L	0.330	0.956	9.060	threading_6	-MNMLALTIILPLIGFVLLAFSRGRWSAIVGVGSVGLAALVTAFIGVDFFGQTYSQPLWTWMSVGDFNIFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEG------YSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELANNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLV-GIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWD------AAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLTAGFFSKDEILAGAMANGHI-N---LM-VAGLVGAFMTSLYTFRMIFIVFHGKEQIH--AHAVKGVTHSLPLIVLLILSTFVGALIVPPLQ
7	SP3	3rkol	0.314	0.956	8.333	threading_7	-MNMLALTIILPLIGFVLLAFSRGSENVSAIVGVGSVGLAALVTAFIGVDFFANSQPLWTWMSVGDFNIFNLVLDGLSLTMLSVVTGVGFLIHMYASWYM------RGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT-PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGV---QA---WDAAIFHLMTHAFFKALLFLASGSVILACHHQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVAGFFSKDEILAGAMANG-HINLMVAGLVGAFMTSLYTFRMIFIVFH----GKEQIHA--HAVKGVTHSLPLIVLLILSTFVGALIVPPLQ
8	SAM-T99	3rkoL	0.299	0.950	9.841	threading_8	----LIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQTYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGE------EGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTP-EVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ------AWDAAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLTAGFFSKDEILAGAMANGH-----INLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG--VTHSLPLIVLLILSTFVGALIVPPLQ
9	MUSTER	3rkoM	0.205	0.956	1.569	threading_9	M--LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSEFDMPWIPRFGI-SIHLAIDGLSLLMVVLTGLLGVLAVLCS-W-------KEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYTFNYEELLNMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDA-QAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT---GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV--VPVITVISTFGLVFASVYSLAMLHRAYF----GKAKSQIASQEGMSLRELFMILLLVVLLVLLGFPILDTSH
10	SPARKS	3rkom	0.192	0.946	3.592	threading_10	MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLSEFDMPWIPRFGIDGLSLLMVVLTGLLGVLAVLCSW-------------KEIEKYQ---GFFHLNLMWILGGVIGVFAIDMFLFFFFWEMMLVPMYFLIALWDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYTFNYEELLNTSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHQAPTAGSVDLAG-ILLKTAAYGLLRFSPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT---GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV--VPVITVISTFGLVFASVYSLAMLHRAYF----GKAKSQIASQEGMSLRELFMILLLVVLLVLLGFPILDTSH

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.462 to 1ciyA SCOP code=b.18.1.3	TM-score=0.460 to 1ciyA SCOP code=b.18.1.3	TM-score=0.460 to 1ciyA SCOP code=b.18.1.3	TM-score=0.459 to 1ciyA SCOP code=b.18.1.3	TM-score=0.460 to 1ciyA SCOP code=b.18.1.3